Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 291 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 126 LLEHVLRAQTG-RELVPVERRAGDERVEAICTALETEDACRIDPGALASRLGVSREHFHR 184
           +++H L +Q G R+ + ++          +   LE      I    LA R  +S  HF R
Sbjct: 163 IVDHALLSQVGLRQGLRLKGGLAPNLRRQLVDYLEAHLDQPITLDELALRCNLSEYHFAR 222

Query: 185 LFRVAVGMAPAHYARLARIGRAKALLREG-RAQADVAAQCGFADQAHFSRWFRRCFGVTP 243
           +FR + G+ P  Y    R+ RA  LLR G     ++A  CGFA  +HFS  FR+  G TP
Sbjct: 223 MFRASFGLPPHQYLLARRLHRACQLLRLGVMPLGEIALLCGFASASHFSNRFRQALGATP 282

Query: 244 GNY 246
           G Y
Sbjct: 283 GEY 285



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 137 RELVPVERRAGDERVEAICTALETEDACRIDPGALASRLGVSREHFHRLFRVAVGMAPAH 196
           R+L+ ++     ER+ A   A E  D       AL S++G+ +       R+  G+AP  
Sbjct: 140 RQLIQLDWDEPGERLLASSLAHEIVDH------ALLSQVGLRQG-----LRLKGGLAPNL 188

Query: 197 YARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWFRRCFGVTPGNYM 247
             +L  +   +A L +     ++A +C  ++  HF+R FR  FG+ P  Y+
Sbjct: 189 RRQL--VDYLEAHLDQPITLDELALRCNLSEY-HFARMFRASFGLPPHQYL 236



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 178 SREHFHRLFRVAVGMAPAHYAR 199
           S  HF   FR A+G  P  Y +
Sbjct: 266 SASHFSNRFRQALGATPGEYRK 287