Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 282 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 9e-24
 Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 5/233 (2%)

Query: 16  KAHFELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLHTAG-VSAQGFRMV 74
           K  +  H H  +S+G I  GR  +  + +    GAG  VLM P ++HT   V+ + +  +
Sbjct: 26  KVCYAAHSHESFSIGVITGGRSTYINSDQCVEVGAGTTVLMNPGVVHTCNPVAGEPWSYL 85

Query: 75  MLYVPHAWAEARLGWPVGLRGELLNGVWHDAAM-ADALACAARSGDGVAVGRLLEHVLRA 133
           ML+V   W +A +G+ +  +    + V +   + A A    AR  D  A    L H L  
Sbjct: 86  MLFVDQPWLQA-VGFTLPTQTWSRSPVLYRRLLQAFADLFDARLPDREARLAALFHELPG 144

Query: 134 QTGRELVPVERRAGDERVEAICTALETEDACRIDPGALASRLGVSREHFHRLFRVAVGMA 193
             G      E   G+ R++A    +    +  +    +    G+SR +  R FR   G+ 
Sbjct: 145 MLGGNAS--EGGEGNPRLDAAAAFIRAHRSDPLSLEDICGACGLSRSYLIRAFRQRFGLT 202

Query: 194 PAHYARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWFRRCFGVTPGNY 246
           P  Y    R+  A+A LR+GR+ A+VA + GFADQAH  R F++    TPG+Y
Sbjct: 203 PHGYLLDQRVQLARAQLRQGRSIAEVAQEAGFADQAHLQRAFKQHLAATPGHY 255



 Score = 30.0 bits (66), Expect = 5e-05
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 182 FHRLFRVAVGMAPAHYARLARIGRAKALLREGRAQA----DVAAQCGFADQAHFSRWFRR 237
           FH L  +  G A        R+  A A +R  R+      D+   CG + +++  R FR+
Sbjct: 139 FHELPGMLGGNASEGGEGNPRLDAAAAFIRAHRSDPLSLEDICGACGLS-RSYLIRAFRQ 197

Query: 238 CFGVTPGNYM 247
            FG+TP  Y+
Sbjct: 198 RFGLTPHGYL 207