Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 83/262 (31%), Positives = 116/262 (44%), Gaps = 25/262 (9%)

Query: 16  KAHF-----ELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLHTA-GVSAQ 69
           +AHF     + HWH  + VG   +G  +F C   R  +  G + L+ P  +H     + +
Sbjct: 19  RAHFVGHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGLAPTEE 78

Query: 70  GFRMVMLYVPHAWAEARLGW-----PVGLRGELLNGVWHDAAMADALACAARS---GDGV 121
           GF    LY+  AW + +L       P        + + HD  +A A A A R+    D  
Sbjct: 79  GFTYSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVHDQDLR 138

Query: 122 AVGRLLEHVLRAQTGRELVPVERRAGDERVEAICTALETEDACRI----DPGA--LASRL 175
            V +     L A   R L    R   D R+    TA    D        D G   LA   
Sbjct: 139 IVRQTAMDDLLACLTRHLHWRRRINPDPRLPL--TAQRARDFLHANLERDIGLEDLAQAC 196

Query: 176 GVSREHFHRLFRVAVGMAPAHYARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWF 235
           G+ R    R F+ A G+AP  Y    R+ RA+ LL +G+  A+VA   GFADQ+H  RWF
Sbjct: 197 GIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQSHLGRWF 256

Query: 236 RRCFGVTPGNYMAREPRCGSLP 257
           RR + +TP +Y     RC +LP
Sbjct: 257 RRAYQLTPADY---RRRCSNLP 275