Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 75/251 (29%), Positives = 111/251 (44%), Gaps = 11/251 (4%)

Query: 7   VEAMFSADPKAHFELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLHTAGV 66
           VE + +   +  F  H H  +    I  G   F   G   +A  G +VL+ P  LHT   
Sbjct: 20  VEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLINPDELHTGAT 79

Query: 67  SAQ-GFRMVMLYVPHAWAEARLG-WPVGLRG--ELLNGVWHDAAMADALA----CAARSG 118
           + + G+R    Y  H      L    +G  G     + V HD A+A A +     +  S 
Sbjct: 80  AHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIHDPALALAFSQLHQLSEASA 139

Query: 119 DGVAVGRLLEHVLRAQTGRELVPVERRAGDERVEAICTALETEDACRIDPG---ALASRL 175
             +         + A   R     E  A      A+  A E  ++   DP    ALA+ +
Sbjct: 140 SALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEALAAAV 199

Query: 176 GVSREHFHRLFRVAVGMAPAHYARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWF 235
            +S  HF R+FR A G+ P  + +  R+ RA+ +L+ G A + VA   GFADQ+H SR F
Sbjct: 200 NLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGFADQSHLSRQF 259

Query: 236 RRCFGVTPGNY 246
           ++ +GVTPG Y
Sbjct: 260 KQAYGVTPGAY 270