Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 274 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 73/259 (28%), Positives = 107/259 (41%), Gaps = 23/259 (8%)

Query: 3   GAVQVEAMFSADPKAHFELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLH 62
           G  ++EA F +     ++ H H  +S+G  L G   F   G  R    G+ +++ P  LH
Sbjct: 22  GIERIEAWFGSHG---YDPHRHDTYSIGRTLAGVQSFHYKGSLRHGIPGNTLVLHPDELH 78

Query: 63  T--AGVSAQGFRMVMLYVPHAWAEARLGW-PVGLRGELLNGVWHDAAMADALACAARSGD 119
              AG  A GFR  M YV  A  +  LG  P+     +  G+  D  +  A     ++ D
Sbjct: 79  DGMAGTDA-GFRYRMAYVDPALIQNVLGGQPLPF---IAGGLSSDPRLYHASEAFVQAVD 134

Query: 120 GVAVGRLLEH--------VLRAQTGRELVPVERRAGDERVEAICTALETEDA-CRIDPGA 170
             A+  L E          LRA  G+   P  R+  D +      A   E     I    
Sbjct: 135 H-ALEPLEEQDALYDLAIALRAVGGK---PRGRKRLDYQAAERARAFIMEHLHVGITLDM 190

Query: 171 LASRLGVSREHFHRLFRVAVGMAPAHYARLARIGRAKALLREGRAQADVAAQCGFADQAH 230
           L    G  R    R FR   G +P  +  L R+   + ++ +G    D A   GF DQ+H
Sbjct: 191 LEQASGRERWSLSRDFRTLYGTSPYRFVTLRRLDCLRRMILDGFTLVDAALAAGFHDQSH 250

Query: 231 FSRWFRRCFGVTPGNYMAR 249
            +R F RC+GV P  ++ R
Sbjct: 251 MTRHFTRCYGVPPLRWLER 269