Pairwise Alignments

Query, 539 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 528 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  124 bits (310), Expect = 1e-32
 Identities = 131/521 (25%), Positives = 225/521 (43%), Gaps = 47/521 (9%)

Query: 21  AAALALGLTAAASVCAQPAAGAGQTLRIQINSDIRSTDPGGNRDDNTDNVLLHVGEGLVA 80
           A  +A  L  A S  A+ A   G TL   +  +        N   +   V   V EGL+ 
Sbjct: 9   ALLVAASLFGAISQAAETAPKRGGTLNFLVEPEPPVLTSLVNSGGSVIKVNAKVIEGLLN 68

Query: 81  LREDTSVGPMLASKVDTSADGLTYTFTLRDGVKFQNGATLTADDVVWNWQRYLKPATNWR 140
              +    P LA+    S DG  YTF LR GVK+ +G   T+ DV ++     K  +   
Sbjct: 69  YDFNMKPIPQLATSWSVSPDGKQYTFHLRQGVKWHDGKDFTSADVAFSILTVKKYNSR-- 126

Query: 141 CLPEFDGKG-MTKVLSVEAPNPKTVVFKLERASALFLTMMARPDCG--SSAIVHRSSVGP 197
                 G+G    V  V+ P+P T + +L + +   ++  +  +       +   + +  
Sbjct: 127 ------GQGTFANVTEVKTPDPYTAIVELSQPAPYLISAFSANEAPIVPKHLYDGTDIRS 180

Query: 198 DGQWKEPVGTGPYKLKEWKRGQYVELTRFDGYSSRAEPRDGLTGGKKAEVENLRFVVIPD 257
           +     PVGTGP+  KEW RG ++   R   Y  + +P           V+ L    IPD
Sbjct: 181 NPYNTAPVGTGPFIFKEWVRGSHIVYERNPNYWDQPKP----------YVDRLVVKFIPD 230

Query: 258 SAAAKAALYSGGID-AFISPSPSDVIEMRKRSDVLVDTT------PVMTMVALLLQTNDP 310
           +A    A  +G +D    SP P + ++  K++  L   T      P  T +   L  ++P
Sbjct: 231 AATRLIAFETGALDLGSESPVPLNELDRVKKNPRLAIETGGYGYGPTQTRIEFNL--DNP 288

Query: 311 VLKDVRIRRALALALDTPEIARSVTEGLSAVNN--SVVPSSSPYYDAVQGSGFKRDLTAA 368
            LK++++R+A+A +++  ++ R+V     AVN+   + P  +P++D+   S +  DL  A
Sbjct: 289 YLKNLKVRQAIAHSINR-DVLRNVVWYGYAVNSPTPITPELAPFHDSAP-SPYPFDLKKA 346

Query: 369 KKLLAEAGYRGQS--IRMIANKRY----EALYSAAVLVQAMASEAGINVELEVLDWATQL 422
           ++LL EAG+  Q+  IR+     Y    +     A  +++  ++ GI V +   D+AT +
Sbjct: 347 EQLLDEAGFPRQADGIRLRLVHDYMPYGDGFKRVAEYLRSALAKVGIEVTIRSQDFATYV 406

Query: 423 DR-YTKGQYQSMAFVYSARIDPALNYEMVSGDKAAQPRKV------WDSPYAQTRLTEAM 475
            R YT   ++      S   DP +  + +   +A +P         + +P     L +A 
Sbjct: 407 KRVYTDRDFEFTNHSISNLFDPTVGVQRLYWSQAFKPGVAFGNGSHYANPEVDKLLEQAA 466

Query: 476 VSRDKARRQALFDEMHKQMLQDVPMIVLFNASDATAMRKNV 516
           V  D A+R   F    + + Q++P I L      T     V
Sbjct: 467 VETDPAKRAEEFRTFQRIVAQELPDINLLQLKRLTIYNTRV 507