Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  404 bits (1039), Expect = e-117
 Identities = 200/313 (63%), Positives = 246/313 (78%)

Query: 1   MFAYLLRRIAMTIPTLLLVSIAVFTLMRLIPGDPVLLMLGEGADPAQLALMRHQMGLDQP 60
           M  ++L+++AM +PTLLL+S+ VF L+RLIPGDP LLMLG+ ADP  LA MRH +GLD  
Sbjct: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60

Query: 61  LPVQYLVWLRHALTGDLGVSTTNGLAVLPLIWERFQVSAVIVLVAVALASLIAVPAGLVA 120
           L  Q+L+W +  L+ DLG S +   AVLPLI +RF VSA IVLVAV  A+LIAVP GL+A
Sbjct: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120

Query: 121 AWRKDKPTDLAIIGAATLMLSVPSFWLGLLLLMFFGQYLGWLPVVGYVPMSENFSQGVLY 180
           AW+++   DL ++  ATL+LS+PSFWLGLLLL  FG  LGWLPVVGYV  S+   Q + Y
Sbjct: 121 AWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSY 180

Query: 181 VILPIATLLLVETGVLTRMSRASTIEILRLEYVTHARAKGVPESQVLRRHVLPNAFNPTL 240
           ++LP+ TL LVE G +TRM+RASTIE+LRLEY+ HARAKG+ E  VL +H LPNAF PT 
Sbjct: 181 MVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTW 240

Query: 241 TMIGLILGHLLSGIAVLETVFTLPGLGRLMIDSIFARDYPVLQGCLLFTACIYVVINLVV 300
           T++GLILG+LL GIAVLETVFTLPG+GRLM+D+IFARDYPVLQGCLL    IYV++NL V
Sbjct: 241 TLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCV 300

Query: 301 DLCYPLFDPRVSV 313
           DL YPLFDPRV +
Sbjct: 301 DLLYPLFDPRVKL 313