Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  219 bits (557), Expect = 9e-62
 Identities = 119/332 (35%), Positives = 194/332 (58%), Gaps = 21/332 (6%)

Query: 1   MFAYLLRRIAMTIPTLLLVSIAVFTLMRLIPGDPVLLMLGE-GADPAQLALMRHQMGLDQ 59
           MF ++L R+++ +PT + +++  F L+RL+PGDP+  M GE G DPA+ A +R   G D+
Sbjct: 1   MFRFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIETMAGERGIDPARHAELRTAYGFDK 60

Query: 60  PLPVQYLVWLRHALTGDLGVSTTNGLAVLPLIWERFQVSAVIVLVAVALASLIAVPAGLV 119
           P+ VQY +++   L GDLG S      V+      F  +  + + A+  A L+ +PAG++
Sbjct: 61  PVIVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGLPAGIL 120

Query: 120 AAWRKDKPTDLAIIGAATLMLSVPSFWLGLLLLMFFGQYLGWLPVVGYVPM--------- 170
           AA R++   D  ++  +    S+P FW GLLL++FF   LGW PV G + +         
Sbjct: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYYIEPETG 180

Query: 171 -----------SENFSQGVLYVILPIATLLLVETGVLTRMSRASTIEILRLEYVTHARAK 219
                      +  F   + ++ILP   L  V   V+ RM+R++ +E+L  +Y+  ARAK
Sbjct: 181 FLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAK 240

Query: 220 GVPESQVLRRHVLPNAFNPTLTMIGLILGHLLSGIAVLETVFTLPGLGRLMIDSIFARDY 279
           G+   +V+  H L NA  P +T+IGL +G L +G  + ET+F+ PG+G+ +I++I  RDY
Sbjct: 241 GLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDY 300

Query: 280 PVLQGCLLFTACIYVVINLVVDLCYPLFDPRV 311
           PVLQG +L    I +++NL+VD+ Y + +PR+
Sbjct: 301 PVLQGGMLLLGGIVMLVNLLVDVAYGVINPRI 332