Pairwise Alignments

Query, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  192 bits (487), Expect = 1e-53
 Identities = 109/267 (40%), Positives = 155/267 (58%), Gaps = 7/267 (2%)

Query: 12  GVLIAVLLVLAVVAAVWT-PYNPLAIDLRSKLQPPSMAH---W---LGTDEFGRDVASRA 64
           G+    L+V   + A W  P++P        L PP       W   LGTDE GRD+ SR 
Sbjct: 41  GLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRL 100

Query: 65  MQGAATSCLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVM 124
           +QGA  S L+ L +V ++   G+++G++AGF        +M   D +LA P LLLA+ ++
Sbjct: 101 IQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIV 160

Query: 125 VIVGANKWGIVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHILPN 184
            I+G      V+A+++   PS VR+ R  V+    R+YV A+R+ G      M+  +LPN
Sbjct: 161 AILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPN 220

Query: 185 CVAPVAVLATSMFGWVLLSESALSFLGLGVPPPAPTWGNMLASARPYMASAVWLCVVPGL 244
           C+AP+ V AT  F   +L  +AL FLGLGV PP P WG MLASAR Y+  A W+  +PGL
Sbjct: 221 CMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGL 280

Query: 245 CIALTLLGINLLGESLRDRLDPRTEKA 271
            I L++L INL+G+ LRD LDP+ + A
Sbjct: 281 TILLSVLAINLMGDGLRDALDPKLKNA 307