Pairwise Alignments

Query, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 304 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  214 bits (544), Expect = 2e-60
 Identities = 113/269 (42%), Positives = 166/269 (61%), Gaps = 6/269 (2%)

Query: 9   LIGGVLIAVLLVLAVVAAVWTPYNPLAIDLRSKLQPP------SMAHWLGTDEFGRDVAS 62
           +IG  +  +L+++AV AAV  P++P      + L PP        A  LGTD  GRD+ S
Sbjct: 36  VIGLAVFILLVLIAVFAAVIAPHDPTQQYRDALLVPPVWQDGGRAAFLLGTDAVGRDMLS 95

Query: 63  RAMQGAATSCLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALG 122
           R + GA  S  + ++ V++A   G+V+G+VAGF  GW D V+M   D +LAFP LLLAL 
Sbjct: 96  RLIYGAQYSLFIGVVVVSIALVGGIVIGLVAGFFGGWVDTVIMRVMDVILAFPSLLLALV 155

Query: 123 VMVIVGANKWGIVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHIL 182
           ++ I+G      ++A+++ Y P   R+ R  V+S   REYV A+R+ G   L  M++ IL
Sbjct: 156 LVAILGPGLTNAMIAIAIVYQPHFARLTRAAVMSELRREYVTAARVAGAGNLRLMFKTIL 215

Query: 183 PNCVAPVAVLATSMFGWVLLSESALSFLGLGVPPPAPTWGNMLASARPYMASAVWLCVVP 242
           PNC+AP+ V AT  F   +L  +AL FLG+G  PPA  WG MLA AR ++  A W+  +P
Sbjct: 216 PNCLAPLIVQATLSFSSAVLDAAALGFLGMGAQPPASEWGTMLAEAREFILRAWWVVTLP 275

Query: 243 GLCIALTLLGINLLGESLRDRLDPRTEKA 271
           GL I +++L INL+G+ LRD LDP+ +++
Sbjct: 276 GLTILISVLAINLMGDGLRDALDPKLKRS 304