Pairwise Alignments

Query, 1031 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1043 a.a., Cobalt-zinc-cadmium resistance protein CzcA from Xanthobacter sp. DMC5

 Score =  449 bits (1155), Expect = e-130
 Identities = 323/1042 (30%), Positives = 533/1042 (51%), Gaps = 50/1042 (4%)

Query: 1    MINLIITQFFRRRHLVWAMSIALVLFGAWSWTQMTVEAYPDLGDVTVQVTTQVNGLASEE 60
            M  +++TQ  R R LV A+++ LV++GA++ T++ V+  PDL   TV + T+  GLA  E
Sbjct: 1    MFTVLVTQSLRNRLLVLALAVVLVVYGAYAVTRLPVDVLPDLNRPTVTIMTEAEGLAPAE 60

Query: 61   IEQQITTPLERALSNTPGLASIRSSSTFGLSLITLTFKDGTDDYFARQRVTERIGQV--S 118
            +EQ +T PLE A++  PGL  +RS+S  GLS++   F  GTD +  RQ++ ER+  V   
Sbjct: 61   VEQLVTFPLETAVNGLPGLIRLRSASGVGLSVVYAEFDFGTDIFRNRQQIAERLALVRDR 120

Query: 119  LPSGAQPGLDPVAGPAGEIYRYTLESDTKNLMELSEIQRWIVIPGLRQVAGVVNITNFGG 178
            LP+   P + P++   G+I  + L SD  + M + E   +++ P L  + GV  +   GG
Sbjct: 121  LPANVSPQMGPISSIMGQILMFALISDIASPMAVREAADFVIRPRLLAIPGVAQVIPMGG 180

Query: 179  FTKEFQLELDPAALQKYGLALSDVVTAINNNSANAGGGRIARGEQSYVVRGIGLITSLDD 238
              ++F++  D AA++ YG+ L  +  A+    +N+GGG   +  + +++R I    SLDD
Sbjct: 181  EVRQFRVAPDLAAMRAYGITLDGLEKALQQFGSNSGGGFADQNGREFLIRNIARTLSLDD 240

Query: 239  LGAVVVSQSGGSPVLVRDLGRLQFGHQERGGILGKDRNPDTIEGIVLMLKYENPSRVLEG 298
            L  +V+ +  G  V +  + ++ +  + + G  G    P      V++   + P      
Sbjct: 241  LKNLVLPRPAGGNVFLHQIAQVDYAARLKRGDAGYMGRP-----AVILSVEKQPEADTLA 295

Query: 299  VHKKIDELQAQL---APMGVKIVPYIDRD-DLVKLTVDKVTHTVLEGMALVCFVLILFLG 354
            + + ++EL A L    P G++I P + R  D +  ++  V   ++E MA+V  VL LFL 
Sbjct: 296  LTRAVEELVADLNRSLPDGIRISPPVFRQADFIAASIGNVEKVLMEAMAVVAVVLFLFLL 355

Query: 355  SPRSAVVAAVAIPMSLVTVFIVMHFTRMPANLFSLG--AIDFGIIVDGAIVVMEAILRRR 412
            + R+  ++  AIP+S++   IV H   +  N  +LG  AI  G +VD A+V +E I RR 
Sbjct: 356  NWRTTFISLTAIPVSILITAIVFHAFGLSINTMTLGGLAIAIGELVDDAVVDVENIFRRL 415

Query: 413  EEEPHATLTE---GNILETVSHVSGPIFFATLIIITAYFPLFAFERAEGKLFKPMAFTVG 469
             E   A         ++     V   I +ATLII+  + PLFA    EG+LF P+     
Sbjct: 416  RENAAAAAPRPVFDVVVAASREVRSGIVYATLIIVLVFVPLFALPGIEGRLFAPLGQAYI 475

Query: 470  YALVGALLCAITLIPSLAYVALRKPMKPFVNKPLV--WLTGAYRRVLGHLLRVPAIAYAL 527
             +++ +LL ++TL P LA+  L    +       +   L   Y  +L    R   +   +
Sbjct: 476  VSILASLLTSVTLTPVLAFYLLPALSRHAERDGALVRLLKRGYAALLSTAFRHQRL--VM 533

Query: 528  SIAALAAVAILGATAG--REFLPDIDEGALWLQVQLPSGLSLDKASEMTAELRHVLLEYP 585
               AL  VA LGATAG  R FLP  +EG+L + +    GLSL ++  M      ++LE P
Sbjct: 534  GTTALLFVAALGATAGLPRAFLPPFNEGSLTISMSFRPGLSLAESHRMGLMAEKIILEVP 593

Query: 586  EVSYVVTQLGRN--DDGTDPWTPSHVEVPVGLKPYSEWPAGVNKAAFVRTLNERFSKMP- 642
            EV  V  + GR   D+  +    S +EV +        P+  ++A     + +R S +P 
Sbjct: 594  EVKAVGRRTGRAELDEHAEGVHASEIEVDL-------QPSVRSRADITADIRDRLSVLPA 646

Query: 643  GFDVGISQPIIDGVNDAVGGAHSPLVLRIYGDDLKESRRIGNEIVDLLHTVRGTASASLF 702
             F+VG  QPI   ++  + G  + + L+++GDDL   R     +   L  + G A   + 
Sbjct: 647  SFNVG--QPISHRLDHMLSGVRAEIALKLFGDDLDTLRTTAETLRQRLAAIPGLADLQVE 704

Query: 703  QEPPIPQVVIKLDREAAARLGVNANDVASLVQTGMGGAPVITVYSGDRTYNVTVKLPKSA 762
            ++  +P+V +++D   AA  G+        +     G  V T+  G+R +++ V+LP + 
Sbjct: 705  RQVRVPEVTVRVDYGRAALYGLQPAQATDALARLSNGRVVSTLVGGNRRFDLIVRLPDAT 764

Query: 763  KSGTEAIGSLLLNGAGGAKIPLSQVASVKLQTGESTISHELNSRQITVRIDN-RGRDLAS 821
            +S     G L+   +G   +PLSQVA VK   G + I  E   R+I V  +   GRD A+
Sbjct: 765  RSADGLAGLLVETPSGW--VPLSQVADVKETDGPNQILREGGRRRIVVLANTAEGRDTAA 822

Query: 822  YLVEAQDRIAKDVKFDHAKFRLQWAGQFENQQRAQARL----AVSLLIVVSIMAVLLFFQ 877
             + + +  IA           L+  G F  Q+ +   +    AVSLL+V +I    L+ +
Sbjct: 823  IIADMRHVIAATDLPPGISASLE--GTFTAQEASMRTIGGLAAVSLLLVFAI----LYSR 876

Query: 878  FGKIRHVALILGVVPMATLGGLIAVHVAGETLNVATAVGFIALFGVSIQNGIIMVANFRR 937
            +       +I+G VP+A +G + A+ +AG+ L+VA+ +GF+ L G++ +NGI+ +++   
Sbjct: 877  YRSALFALVIMGSVPLALIGAVTALWLAGQPLSVASMIGFVTLTGIAARNGILKISHIIN 936

Query: 938  VR-GEGLAL-EASVLEGATERLRPVLMTATVASIGMLPAALATGV-GTDVQRGLATVVVG 994
            +   EGL    A V+ G+ ERL PVLMTAT A+I +LP      V G ++   +A  + G
Sbjct: 937  LAISEGLPFGPALVMRGSLERLTPVLMTATSAAIALLPLMSGAEVPGKEILHPVAITIFG 996

Query: 995  GLVVSTLLTLFILPTLFFALER 1016
            GLV +TLL   + P L  A  R
Sbjct: 997  GLVSATLLDAVLTPVLVLAYGR 1018



 Score = 34.7 bits (78), Expect = 4e-05
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 17/182 (9%)

Query: 330  TVDKVTHTVLEGMALVCFVLI--LFLGSPRSAVVAAV---AIPMSLVTVFIVMHFTRMPA 384
            T  + +   + G+A V  +L+  +     RSA+ A V   ++P++L+     +     P 
Sbjct: 849  TAQEASMRTIGGLAAVSLLLVFAILYSRYRSALFALVIMGSVPLALIGAVTALWLAGQPL 908

Query: 385  NLFSLGAIDFGIIVDGAIVVMEAILRRREEEPHATLTEGNILETVSHVSGPIFFATLIII 444
            ++ S+     G +    I     IL+      +  ++EG        + G +   T +++
Sbjct: 909  SVASM----IGFVTLTGIAARNGILKI-SHIINLAISEGLPFGPALVMRGSLERLTPVLM 963

Query: 445  TA------YFPLFAFERAEGK-LFKPMAFTVGYALVGALLCAITLIPSLAYVALRKPMKP 497
            TA        PL +     GK +  P+A T+   LV A L    L P L     R+P++ 
Sbjct: 964  TATSAAIALLPLMSGAEVPGKEILHPVAITIFGGLVSATLLDAVLTPVLVLAYGRRPLER 1023

Query: 498  FV 499
             V
Sbjct: 1024 LV 1025