Pairwise Alignments

Query, 1031 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1052 a.a., probable copper efflux transporter, CzcA family from Pseudomonas putida KT2440

 Score =  517 bits (1332), Expect = e-150
 Identities = 341/1042 (32%), Positives = 540/1042 (51%), Gaps = 31/1042 (2%)

Query: 1    MINLIITQFFRRRHLVWAMSIALVLFGAWSWTQMTVEAYPDLGDVTVQVTTQVNGLASEE 60
            MI  +I      R LV   ++ L+ +G +S   + ++A PDL D  V + T   G A + 
Sbjct: 1    MIEKLIRWSVSNRMLVLLATLFLMAWGIFSLRSLPIDALPDLSDAQVIIRTSYPGQAPQI 60

Query: 61   IEQQITTPLERALSNTPGLASIRSSSTFGLSLITLTFKDGTDDYFARQRVTERIGQVS-- 118
            +E Q+T PL   + + PG  ++R  S FG S + + F+DGTD Y+AR RV E + QV   
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGFSAFGDSFVYVIFEDGTDLYWARSRVLEYLSQVQSR 120

Query: 119  LPSGAQPGLDPVAGPAGEIYRYTL--ESDTKNLMELSEIQRWIVIPGLRQVAGVVNITNF 176
            LP+ A+P L P A   G IY+Y L   S   +L +L  +Q W +   L+ V  V  + + 
Sbjct: 121  LPATAKPALGPDATGVGWIYQYALVDRSGRHDLAQLRSLQDWFLRFELKTVPDVAEVASI 180

Query: 177  GGFTKEFQLELDPAALQKYGLALSDVVTAINNNSANAGGGRIARGEQSYVVRGIGLITSL 236
            GG  K++Q+ LDP  +   G+   +V  AI   +   GGG + +GE  ++VR  G + +L
Sbjct: 181  GGMVKQYQVVLDPLRMASLGITQGEVANAIGKANQETGGGVLEQGEAEFMVRASGYLKTL 240

Query: 237  DDLGAVVVS-QSGGSPVLVRDLGRLQFGHQERGGILGKDRNPDTIEGIVLMLKYENPSRV 295
            DD  A+ +   + G+PV++ D+ R+Q G + R GI   D   + + G+V++   +N    
Sbjct: 241  DDFRAIPLRLAANGAPVMLGDVARVQLGPEARRGIGELDGEGEAVGGVVILRSGKNAREA 300

Query: 296  LEGVHKKIDELQAQLAPMGVKIVPYIDRDDLVKLTVDKVTHTVLEGMALVCFVLILFLGS 355
            +  V  K++ L+  L P GV++V   DR  L+   VD ++H ++E   +V  V   FL  
Sbjct: 301  ITHVKDKLETLKKSL-PAGVELVTTYDRSQLIDRAVDNLSHKLIEEFIVVALVCAAFLWH 359

Query: 356  PRSAVVAAVAIPMSLVTVFIVMHFTRMPANLFSLG--AIDFGIIVDGAIVVMEAILRRRE 413
             RS++VA V++P+ ++   I+M    + AN+ SLG  AI  G +VD A+V++E    +R 
Sbjct: 360  LRSSLVAIVSLPVGVLIALIIMRHQGINANIMSLGGIAIAIGAMVDAAVVMIEN-AHKRV 418

Query: 414  EEPHATLTEGNILETVSH----------VSGPIFFATLIIITAYFPLFAFERAEGKLFKP 463
            E  HA    G +L    H          V   +FF+ +II  ++ P+F  +  EG+LF P
Sbjct: 419  EAWHARY-PGQVLRGAEHWRVMTDAAVEVGPALFFSLMIITLSFVPVFTLQAQEGRLFAP 477

Query: 464  MAFTVGYALVGALLCAITLIPSLAYVALRKPMKPFVNKPL-VWLTGAYRRVLGHLLRVPA 522
            +AFT  YA+  A   A+TL+P L    +R P+      PL   L   YR  L  +LR P 
Sbjct: 478  LAFTKTYAMAAAAGLAVTLVPVLMGYWIRGPLPAEERNPLNRGLIRVYRPALEVVLRRPW 537

Query: 523  IAYALSIAALAAVAILGATAGREFLPDIDEGALWLQVQLPSGLSLDKASEMTAELRHVLL 582
            +    ++A L +     +  G EFLP +DEG L        GLS  KASE+      ++ 
Sbjct: 538  MTLLGALAILLSSLWPLSHLGGEFLPPLDEGDLLYMPSALPGLSAQKASELLQRTDRLIR 597

Query: 583  EYPEVSYVVTQLGRNDDGTDPWTPSHVEVPVGLKPYSEWPAGVNKAAFVRTLNERFSKMP 642
              PEV+ V  + GR +  TDP      E  V LKP  +W  G++    V  L +R  ++P
Sbjct: 598  TVPEVASVFGKAGRAESATDPAPLEMFETIVRLKPKDQWRPGMSSEKLVEEL-DRTVRVP 656

Query: 643  GFDVGISQPIIDGVNDAVGGAHSPLVLRIYGDDLKESRRIGNEIVDLLHTVRGTASASLF 702
            G       PI + ++    G  SP+ +++ G DL +       I  +  +V G  SA   
Sbjct: 657  GLTNIWIPPIRNRIDMLATGIKSPIGVKVAGSDLAQIDHTTLAIERVAKSVPGVTSALAE 716

Query: 703  QEPPIPQVVIKLDREAAARLGVNANDVASLVQTGMGGAPVITVYSGDRTYNVTVKLPKSA 762
            +      V + +DR+AAAR G+N  DV ++V   +GG  +     G   Y ++V+ P+  
Sbjct: 717  RLTGGRYVDLDIDRQAAARYGLNIADVQAIVAGAIGGETIGETVEGLARYPISVRYPREW 776

Query: 763  KSGTEAIGSLLLNGAGGAKIPLSQVASVKLQTGESTISHELNSRQITVRIDNRGRDLASY 822
            +   +A+  L +  A G +I L  VA V +  G   +  E       V ID RGRDL+S 
Sbjct: 777  RDSVDALRQLPVYTAQGGQITLGTVARVGIAEGPPMLKSENARPSGWVYIDVRGRDLSSV 836

Query: 823  LVEAQDRIAKDVKFDHAKFRLQWAGQFENQQRAQARLAVSLLIVVSIMAVLLFFQFGKIR 882
            + + +  + ++VK +     L ++GQFE  +RA ARLA  +   ++I+ VLL+  FG++ 
Sbjct: 837  VADLRRAVDREVKLNPG-MSLSYSGQFEYLERANARLAWVVPATLAIIFVLLYLTFGRMG 895

Query: 883  HVALILGVVPMATLGGLIAVHVAGETLNVATAVGFIALFGVSIQNGIIMVANFRRVRGEG 942
               LI+G +P A  GG+  +++ G  L+VAT VGFIAL GV+ + G+IM+        E 
Sbjct: 896  EALLIMGTLPFALTGGVWLLYLMGFNLSVATGVGFIALAGVAAEFGVIMLIYLNNAWAER 955

Query: 943  L--------ALEASVLEGATERLRPVLMTATVASIGMLPAALATGVGTDVQRGLATVVVG 994
                     AL  ++ EGA +R+RP  MT  V   G+LP   + G G++V   +A  +VG
Sbjct: 956  QANSEHTQDALLEAIREGAVQRIRPKAMTVAVIVAGLLPILWSNGTGSEVMSRIAVPMVG 1015

Query: 995  GLVVSTLLTLFILPTLFFALER 1016
            G++ + LL+LF++P  ++ + R
Sbjct: 1016 GMLTAPLLSLFVIPAAYWLVRR 1037