Pairwise Alignments

Query, 1031 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1028 a.a., RND multidrug efflux transporter; Acriflavin resistance protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  327 bits (837), Expect = 3e-93
 Identities = 280/1032 (27%), Positives = 472/1032 (45%), Gaps = 61/1032 (5%)

Query: 11   RRRHLVWAMSIALVLFGAWSWTQMTVEAYPDLGDVTVQVTTQVNGLASEEIEQQITTPLE 70
            RR      +S+ ++L G  S+  +TV  YP + + TV V+T+  G +SE IE Q+T PLE
Sbjct: 9    RRPVFASVLSLLILLVGIVSFNGLTVREYPKIDEPTVTVSTRFGGASSEVIESQVTKPLE 68

Query: 71   RALSNTPGLASIRSSSTFGLSLITLTFKDGTDDYFARQRVTERIGQVS--LPSGA-QPGL 127
             +L+   GL  I S S    S IT+ FK   D   A   V +++ +V   LP    +P +
Sbjct: 69   DSLAGIEGLDVITSISRQEQSQITVRFKLERDPDSAAADVRDKVSRVRQRLPQDVDEPVI 128

Query: 128  DPVAGPAGEIYRYTLESDTKNLMELSEIQRWIVIPGLRQVAGVVNITNFGGFTKEFQLEL 187
              V   A  +    L SDT + ++LS+    +  P L+   G   +  +G      ++ +
Sbjct: 129  AKVEADASPVIWLALTSDTHSALQLSDFANRLAKPVLQTAPGAAEVRVYGERRYSMRIWM 188

Query: 188  DPAALQKYGLALSDVVTAINNNSANAGGGRIARGEQSYVVRGIGLITSLDDLGAVVVSQS 247
            DP  L  Y L + DV  A+  ++     GRI    + + V     + +     AV +   
Sbjct: 189  DPDRLAAYALTVQDVEDALRRSNLEVPAGRIESTLREFNVTAATDLQTPAQFAAVAIRTI 248

Query: 248  GGSPVLVRDLGRL-QFGHQERGGILGKDRNPDTIEGIVLMLKYENPSRVLEGVHKKIDEL 306
             G  + + D+ R+ Q    ER  +    R  D +   V+     NP  +   V + ++++
Sbjct: 249  NGQTIRIGDVARVVQAPQDERTSVRLNGR--DAVSLGVIRQATANPLELSAAVRQMLEKV 306

Query: 307  QAQLAPMGVKIVPYIDRDDLVKLTVDKVTHTVLEGMALVCFVLILFLGSPRSAVVAAVAI 366
            +  L P GV +    D    +  ++  V  T+ E + LV  V+ +FL + R++++  + I
Sbjct: 307  KQDL-PAGVNVDVANDNSVFIDRSIKAVYTTIAEAVVLVALVIFVFLRTLRASIIPLMTI 365

Query: 367  PMSLVTVFIVMHFTRMPANLFSLGAI--DFGIIVDGAIVVMEAILRRREE--EPHATLTE 422
            P+SL+  F +M       N  +L A+    G++VD AIV++E I R  EE  +P     +
Sbjct: 366  PVSLIGAFALMAMFGFSINTLTLLALVLAIGLVVDDAIVMLENIYRHIEEGMKPFDAAIQ 425

Query: 423  GNILETVSHVSGPIFFATLIIITAYFPLFAFERAEGKLFKPMAFTVGYALVGALLCAITL 482
            G        +   I   TL +   Y PL       G+LF   A  +  A+V +   A+TL
Sbjct: 426  G-----AREIGFAIVAMTLTLAAVYAPLAFTPGRTGRLFAEFALALAGAVVVSGFVALTL 480

Query: 483  IPSLAYVALRKPMKPF-----VNKPLVWLTGAYRRVLGHLLRVPAIAYALSIAALAAVAI 537
             P L    LR    P      + + L  +T  + R LG  LRV  +  A+   +  A A 
Sbjct: 481  SPMLCSKLLRHNPNPGRFDRGMERVLNAVTRGFSRALGASLRVRWLVVAVMAGSALASAW 540

Query: 538  LGATAGREFLPDIDEGALWLQVQLPSGLSLDKASEMTAELRHVLLEYPEVSYVVTQLGRN 597
            +  T  +E  P  D G +   +  P G +L    +    + ++  +YPE   +   +G  
Sbjct: 541  MLQTMRQELAPIEDRGVILANINGPDGATLAYTRKYAEAIENIAQDYPEFDRIFVNVGN- 599

Query: 598  DDGTDPWTPSHVEVPVGLK--PYSEWPAGVNKAAFVRTLNERFSKMPGFDV-GISQPIID 654
                    PS  +  V ++  P+ E      + A  R +  R + +PG     I+ P + 
Sbjct: 600  --------PSVAQGVVFMRALPWEERERSTQRIA--REITPRLASLPGISAFPITPPSL- 648

Query: 655  GVNDAVGGAHSPLVLRIYGDDLKES-----RRIGNEIVDLLHTVRGTASASLFQEPPIPQ 709
                  G    P+   I   D  E+     RR  +E+      V+      L +    P+
Sbjct: 649  ----GQGFRERPINYVIVTSDSYENLAQTVRRFQDELSKNPGLVQIDTDLRLNK----PE 700

Query: 710  VVIKLDREAAARLGVNANDVASLVQTGMGGAPVITVYSGD-RTYNVTVKLPKSAKSGTEA 768
            + + +DRE AA +GVN + +A  V+T +GG  ++T Y  D   Y+V V+     +S  E 
Sbjct: 701  IRMDVDRERAADMGVNVDAIARTVETMLGGR-IVTRYKRDGEQYDVVVQTVSGNRSTPED 759

Query: 769  IGSLLLNGAGGAKIPLSQVASVKLQTGESTISHELN---SRQITVRIDNRGRDLA-SYLV 824
            I  L + G   A IPL+ +  +     E  +  ELN    R+      N   D A    +
Sbjct: 760  IDRLFVRGRNDAMIPLASLVKIS----EVVVPRELNHFGQRRSASLTANLAPDYALGEAL 815

Query: 825  EAQDRIAKDVKFDHAKFRLQWAGQFENQQRAQARLAVSLLIVVSIMAVLLFFQFGKIRHV 884
            +  D+ A++V    A +     GQ    + A   LA+   + +  + ++L  QF      
Sbjct: 816  QFMDKTAREVL--PAGYTTDLNGQSREFRNASGSLAIVFALSLLFIYLVLAAQFESFVDP 873

Query: 885  ALILGVVPMATLGGLIAVHVAGETLNVATAVGFIALFGVSIQNGIIMVANFRRVRGEGLA 944
             +I+  VP++ +G L+A+ + G T+NV + +G I L G+  ++GI++V    ++R +GL 
Sbjct: 874  FIIMLSVPLSMMGALLALKLTGGTINVFSQIGLITLVGLITKHGILIVEFANQLRDQGLE 933

Query: 945  LEASVLEGATERLRPVLMTATVASIGMLPAALATGVGTDVQRGLATVVVGGLVVSTLLTL 1004
               +V + A  RLRP+LMT     +G +P ALA+G G + ++ +  V+VGG+ V TLLT+
Sbjct: 934  KFEAVRQSAALRLRPILMTTGAMVLGAIPLALASGAGAESRQQIGWVIVGGMSVGTLLTI 993

Query: 1005 FILPTLFFALER 1016
            F++PT++  L R
Sbjct: 994  FVVPTMYTLLSR 1005