Pairwise Alignments

Query, 1031 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1062 a.a., Cation efflux system protein CusA from Azospirillum sp. SherDot2

 Score =  562 bits (1449), Expect = e-164
 Identities = 340/1035 (32%), Positives = 562/1035 (54%), Gaps = 32/1035 (3%)

Query: 1    MINLIITQFFRRRHLVWAMSIALVLFGAWSWTQMTVEAYPDLGDVTVQVTTQVNGLASEE 60
            MI  II    R   LV   ++ L+  G +S +++ ++A PDL DV V + T   G A + 
Sbjct: 1    MIAAIIHWSARNVALVLLSTLFLIAAGLYSVSRIPLDALPDLSDVQVILYTDYPGQAPQV 60

Query: 61   IEQQITTPLERALSNTPGLASIRSSSTFGLSLITLTFKDGTDDYFARQRVTERIGQVS-- 118
            +E Q+T PL  A+ + P    +R  S FG S + + F+DGTD Y+AR RV E +   +  
Sbjct: 61   VEDQVTYPLTTAMLSVPKSKVVRGFSFFGASFVYVIFEDGTDIYWARSRVLEYLNFAAKR 120

Query: 119  LPSGAQPGLDPVAGPAGEIYRYTLESDTKNLMELSEIQRWIVIPGLRQVAGVVNITNFGG 178
            LP+G  P L P A   G +Y+Y + +  + L EL  +Q W +   L +  GV  + + GG
Sbjct: 121  LPNGVTPTLGPDATGVGWVYQYVVLAKDRTLAELRTLQDWYLRYQLTKAEGVAEVASVGG 180

Query: 179  FTKEFQLELDPAALQKYGLALSDVVTAINNNSANAGGGRIARGEQSYVVRGIGLITSLDD 238
            F +++Q+ +DP  LQ YG+ L+ +  AI  ++ + GG  +   E  YVVRG G +  + D
Sbjct: 181  FVQQYQVVVDPQKLQAYGVPLAKIAQAIRTSNQDVGGRVVEMAETEYVVRGRGYLRGIKD 240

Query: 239  LGAVVVSQSGGSPVLVRDLGRLQFGHQERGGILGKDRNPDTIEGIVLMLKYENPSRVLEG 298
            +  +V+    G+P+L+RD+ R++ G  ER G+   +   + + G+ L    +N   V++ 
Sbjct: 241  IEEIVLKVDRGTPILLRDVARVEIGPDERRGLTELNGEGEVVSGVALQRYGQNALSVIQS 300

Query: 299  VHKKIDELQAQLAPMGVKIVPYIDRDDLVKLTVDKVTHTVLEGMALVCFVLILFLGSPRS 358
            V  K+ EL+A L P GV I    DR +L+   V+ +  T++E   +V  V I+FL   RS
Sbjct: 301  VKDKLAELKAGL-PEGVSIESVYDRSELILRAVENLKGTLIEESVIVALVCIVFLLHVRS 359

Query: 359  AVVAAVAIPMSLVTVFIVMHFTRMPANLFSLG--AIDFGIIVDGAIVVMEAILRRREEEP 416
            A+VA V +P+ ++   +VM    M +N+ SLG  AI  G +VD +IV++E   +R E  P
Sbjct: 360  ALVAIVTLPVGVLIAIMVMDAMGMTSNIMSLGGIAIAVGAMVDASIVMIENAHKRLEHAP 419

Query: 417  HATLTEGNILETVSHVSGPIFFATLIIITAYFPLFAFERAEGKLFKPMAFTVGYALVGAL 476
                    +++    V   +FF+ L+I  ++ P+F  E  EG+LFKP+AFT  +A+ GA 
Sbjct: 420  PDANRAKVLIDAAVEVGPALFFSLLVITVSFLPVFTLEAQEGRLFKPLAFTKTFAMAGAA 479

Query: 477  LCAITLIPSLAYVALRKPMKPF----VNKPLVWLTGAYRRVLGHLLRVPAIAYALSIAAL 532
              +ITL+P L  + +R  + P     VN+ L+WL     R++ H  ++P I  AL +   
Sbjct: 480  FLSITLVPVLMMLFVRGRIIPERKNPVNRALIWLYRPMIRLVLH-AKIPTILIALGLLGW 538

Query: 533  AAVAILGATAGREFLPDIDEGALWLQVQLPSGLSLDKASEMTAELRHVLLEYPEVSYVVT 592
            + V    +  G EF+P I+EG +        GLS+ KA+E+      +L  +PEV  V  
Sbjct: 539  SVVP--ASKLGSEFMPTINEGTILYMPSTLPGLSITKAAELLQTQDRILKSFPEVGSVYG 596

Query: 593  QLGRNDDGTDPWTPSHVEVPVGLKPYSEWPAGVNKAAFVRTLNERFSKMPGFDVGISQPI 652
            + GR    TDP      E  + LKP +EW  G+     V  + ++  +MPG     + P+
Sbjct: 597  KAGRAVTATDPAPTEMFETVINLKPQAEWRQGMTYDKLVAEM-DKAVQMPGISNAWTMPL 655

Query: 653  IDGVNDAVGGAHSPLVLRIYGDDLKESRRIGNEIVDLLHTVRGTASASLFQEPPIPQVVI 712
               ++    G  +P+ ++++G DL+E  R+  EI  ++  V GT SA  + E  +    +
Sbjct: 656  RARIDMLSTGIRTPIGIKVFGKDLEEMERLAREIEAVVKQVPGTTSA--YAERIVGGFYL 713

Query: 713  KLD--REAAARLGVNANDVASLVQTGMGGAPVITVYSGDRTYNVTVKLPKSAKSGTEAIG 770
            ++D  RE  AR G+   D+   + T +GG  V T   G   ++V V+ P+  +S  +AI 
Sbjct: 714  EIDPNREQLARYGLTVGDLQDTILTALGGEMVTTTVEGRERFSVNVRYPRELRSNPDAIA 773

Query: 771  S-LLLNGAGGAKIPLSQVASVKLQTGESTISHELNSRQITVRIDNRGRDLASYLVEAQDR 829
            S +LL+   G  IPL Q+ASV+L  G +T+  E       + +D R RD+  Y+ +A+  
Sbjct: 774  SRILLHPEAGGAIPLGQLASVRLTKGPATVRTENALLSAYIYVDIRDRDIGGYVADARKA 833

Query: 830  IAKDVKFDHAKFRLQWAGQFENQQRAQARLAVSLLIVVSIMAVLLFFQFGKIRHVALILG 889
            +A+ V+   A + + W+GQFE  +RA  +L + + + ++I+ +L++  F +I    +++ 
Sbjct: 834  VAEQVQMP-AGYYVTWSGQFEYMERAVEKLKIVIPVTIAIIFLLMYLNFRRITETLIVML 892

Query: 890  VVPMATLGGLIAVHVAGETLNVATAVGFIALFGVSIQNGIIMVANF--------RRVRGE 941
             +P A +GG+  + + G  L+VA AVGFIAL GV+ + G+IM+           RR   E
Sbjct: 893  SLPFALVGGVWYMSLLGFNLSVAVAVGFIALAGVAAETGVIMLIYLDHALQDMKRRRAAE 952

Query: 942  GLA-----LEASVLEGATERLRPVLMTATVASIGMLPAALATGVGTDVQRGLATVVVGGL 996
            GLA     L  +++EGA ER+RP +MT      G+LP   + G G++V + +A  ++GG+
Sbjct: 953  GLAMTKADLYEAIMEGAVERVRPKMMTVVAIMAGLLPIMWSHGTGSEVMQRIAVPMIGGM 1012

Query: 997  VVSTLLTLFILPTLF 1011
            + ST+LTL ++P ++
Sbjct: 1013 ISSTVLTLLVIPAIY 1027