Pairwise Alignments

Query, 307 a.a., Transcriptional regulator ligR, LysR family from Variovorax sp. SCN45

Subject, 305 a.a., DNA-binding transcriptional dual regulator of nitrogen assimilation (NCBI) from Escherichia coli BW25113

 Score =  165 bits (418), Expect = 1e-45
 Identities = 98/296 (33%), Positives = 167/296 (56%), Gaps = 6/296 (2%)

Query: 1   MDLKQLEYFIRVAELGSFTRASTVIDIAQPALSRQVRQLEVELRQNLLVRNGRGVVPTDA 60
           M+ ++L+YF+++ ++GS T+A+ V+ IAQPALS+QV  LE EL Q LL+R  RGV PTDA
Sbjct: 1   MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDA 60

Query: 61  GKRLLEHGRGILHQVERAKEDMGRMRGALAGRVAVGLPP-SVAGVLTVPLVRSVRERLPD 119
           GK L  H R IL Q E+A+  +  +  AL+G+V++G  P + A  +T+PL+++VR   P+
Sbjct: 61  GKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPE 120

Query: 120 AALSITESLSTAMQESLLTGRLDIALLYNPQPSTDVDSETVLEEELFLVSAIKGTGRGRR 179
             + + E+    + E L+  +LD+A++Y   P   V S+ +L+E+LFLV       +   
Sbjct: 121 IVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGT-----QDCP 175

Query: 180 GAPLALAQLADQPLVIPTRPNAIRMLVEAQLGAIGRRPSIALEIDGVPAILALVADGAGH 239
           G  + +  +A   L +P+  +AIR+ V+           +  EI+ +  + A +A G G 
Sbjct: 176 GQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGV 235

Query: 240 AVLSRNAVAIAERSQRYAIRPIAEPGLRSRLALAASSQRPVTRTQRAMGELLRELV 295
           AVL  +A      +    +  I  P +   L+L   ++  ++   +A+ ELL  ++
Sbjct: 236 AVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVI 291