Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 30/250 (12%)

Query: 4   TLVSILISGTPLIYVTLAGVLAQRA--GIWNLGLEGLMIIGSCALIVGIVQ--TGSFAQA 59
           TLV IL S T L    L+ +  Q +   I  +G+  +++ G   L VG V   +G+    
Sbjct: 42  TLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALSGTLTAG 101

Query: 60  MLIA---VGLCVAASALLWWV--------VERLKANPIIAGLGLTGLGLGGTSLAIQALY 108
           +++A    GL + A  L+           V  L   PII  L   G+  G     +  +Y
Sbjct: 102 LMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARG-----LGLMY 156

Query: 109 DSEATVTAPFGIPKLNSLFGADLGPFGGLSVFVLLMPVAVWLVWLLLERTRLGLQMSASG 168
                ++   G+P   + FG +     G+ V +L+M +   + ++LL+ TR+G  + A G
Sbjct: 157 TDGYPIS---GLPDWFAFFGRE--SLFGIQVPILIMLLTYLVAYVLLQHTRIGRYIYAIG 211

Query: 169 EHPFAARSVGVNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFM--AFAA 226
            +  A R  GV  +R +LL   + G+  AI G  L     ++ S    AG  F   A AA
Sbjct: 212 GNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTS---RLMSGQPNAGVSFELDAIAA 268

Query: 227 VIFGAGGALG 236
           V+ G     G
Sbjct: 269 VVLGGASIAG 278