Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 305 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 17/233 (7%)

Query: 23  VLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAM-----LIAVGLCVAASALLWWV 77
           ++  + G+ N+     + IG+    V    T  FA          A+ L    +  + W+
Sbjct: 34  IIFGQMGVINMAHGEFLTIGAYTTYVCSSLTAHFAPGFQPYYFFFAIALSFLVAGAIGWL 93

Query: 78  VERLKANPIIAGLGLTGLGLGGTSLAIQALYDS-----EATVTAPFGIPKLNSLFGADLG 132
           VE    + +      T L   G SL +Q  + S     E +   P  +    +   A   
Sbjct: 94  VEWAMISRLYKRPLDTLLATWGLSLVMQQTFRSVFGAREVSAEPPAWLMGSVNFTDAIEI 153

Query: 133 PFGGLSVFVLLMPVAVWLVWLLLERTRLGLQMSASGEHPFAARSVGVNPSRMRLLALALG 192
           P  GL +  L + +    ++L+L R+R GLQ+ A+ ++   +R+VG+N  ++  +  ALG
Sbjct: 154 PRNGLFMMALTLLLTA-AIFLMLYRSRWGLQVRATVQNRLMSRAVGINTRKVDRMTFALG 212

Query: 193 GVLCAIGGAELAGGSLQIFSQNMTAGRGFM--AFAAVIFGAGGALGATAAALF 243
             +  + GA        I S   TAG  ++   F  V+FG   +L  T A+ F
Sbjct: 213 CGVAGVAGAAFT----TIGSTGPTAGSQYIVDTFLVVVFGGAQSLFGTIASAF 261