Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 6e-27
 Identities = 82/280 (29%), Positives = 130/280 (46%), Gaps = 5/280 (1%)

Query: 6   VSILISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAVG 65
           V++L   TPLI  TL  +L +RAG+ NLG+EG+M+ G+    + +         + +A  
Sbjct: 15  VAVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVYAGAPLWVGVGVAAL 74

Query: 66  LCVAASALLWWVVERLKANPIIAGLGLTGLGLGGTSLAIQALYDSEATVTAPFGIPKLNS 125
             +    L  ++   L  +  ++GLG+T L    +    +  +    T         ++ 
Sbjct: 75  TGMVFGLLHAFLTVGLALSQHVSGLGITLLATALSYFGYRVSFPKVNTPPTITPFAPMDW 134

Query: 126 LFGADLGPFGGLSVFVLLM-PVAVWLVWLLLERTRLGLQMSASGEHPFAARSVGVNPSRM 184
           L    L     L++F LL+ PV  W+++    RT LGL +  +GE+P AA S GV+ +  
Sbjct: 135 LPVPILNAQTALTLFALLLVPVVGWVLY----RTPLGLALRMAGENPQAAESQGVSVAAT 190

Query: 185 RLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGGALGATAAALFF 244
           R  A+  G  L  + G+ L   +   F  NM  GRG++  A V+F +     A   AL F
Sbjct: 191 RTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASWRPGKALLGALLF 250

Query: 245 AVVSALGIRAQLVYGGAISNDLLQSLPYLATIFGVWLSTR 284
           A   AL +R Q      +   L   LPYL +I  + L  R
Sbjct: 251 AFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVAR 290