Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 367 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 18/262 (6%)

Query: 3   DTLVSILISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGSC-ALIVGIV---QTGSFAQ 58
           D +   L   T  I+  L+  +A  AG++N+G EG   +G   A +V +        +  
Sbjct: 56  DAIGFTLFYTTSFIFTGLSVAVAFHAGLFNIGSEGQAYVGGLGAALVALALDRYVPWYVT 115

Query: 59  AMLIAVGLCVAASALLW---WVVERLKANPIIAGLGLTGLG------LGGTSLAIQALYD 109
                +G  V  +A  +   W+  +  ++ +I  +    +       L    L +     
Sbjct: 116 MPFAVIGAAVFGAAWAFIPAWLQAKRGSHVVITTIMFNFIAAALMVYLLVNVLIVPGKMA 175

Query: 110 SEATVTAPFG-IPKLNSL---FGADLGPFGGLSVFVLLMPVAVWLVWLLLERTRLGLQMS 165
            E     P G +PKL+ L   FG  LGP    +V  L+  V  +LVW+L+ RT+LG +M 
Sbjct: 176 PETRTFLPGGQLPKLDWLMAWFGLKLGP-APFNVSFLIALVMCFLVWVLIWRTKLGYEMR 234

Query: 166 ASGEHPFAARSVGVNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFA 225
             G  P AA   G+  SR  ++A+ + G L  +       G+          G GF+  A
Sbjct: 235 TLGVSPSAAIYAGIPYSRTVIIAMLISGGLAGMMALNPVMGASARLQVEFVGGAGFVGIA 294

Query: 226 AVIFGAGGALGATAAALFFAVV 247
             + G    LG   +AL F ++
Sbjct: 295 VSLMGRSHPLGIIFSALLFGIL 316