Pairwise Alignments

Query, 171 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

Subject, 278 a.a., peptigoglycan-binding protein LysM from Pseudomonas simiae WCS417

 Score =  127 bits (320), Expect = 1e-34
 Identities = 68/139 (48%), Positives = 88/139 (63%), Gaps = 8/139 (5%)

Query: 31  PWPTPPAAKPPVVQRPAAQFIRPANGPTIARF--DGDRVKGIDIAGTLGDPVVASADGRV 88
           P P PPA   P        +  P+NG  I +F  +G   KGIDIAG LG PV+A++DG V
Sbjct: 146 PAPLPPAGPAPT------GWGWPSNGVLIGKFSSNGSLNKGIDIAGDLGQPVLAASDGTV 199

Query: 89  VYVGGELPAYGNMVIVKHNETFLTAYAHLQTIFVKEGTVVRQGDKIAEMGRSNADRVKLR 148
           VY G  L  YG +VI+KH++T+++AY H + + V+EG  V+ G  IAEMG +  DRVKL 
Sbjct: 200 VYAGSGLRGYGELVIIKHSDTYVSAYGHNRRLLVREGQQVKVGQTIAEMGSTGTDRVKLH 259

Query: 149 FEIRRNGNPVDPEPYLNGR 167
           FEIRR G PVDP  +L  R
Sbjct: 260 FEIRRQGKPVDPLQFLPRR 278