Pairwise Alignments

Query, 171 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

Subject, 379 a.a., activator of AmiC murein hydrolase activity, lipoprotein from Escherichia coli BL21

 Score =  114 bits (286), Expect = 1e-30
 Identities = 66/162 (40%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 12  AAALLAASLAACTTVDLNTPWPTPPAAKPPV----VQRPAAQFIRPANGPTIARFDGDRV 67
           A  +L  +  A TTV      PT    +P V       P + +  P  G  I  F     
Sbjct: 218 ANKMLPNNKPAATTVTAPVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEG 277

Query: 68  --KGIDIAGTLGDPVVASADGRVVYVGGELPAYGNMVIVKHNETFLTAYAHLQTIFVKEG 125
             KGIDIAG+ G  ++A+ADGRVVY G  L  YGN++I+KHN+ +L+AYAH  T+ V+E 
Sbjct: 278 GNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQ 337

Query: 126 TVVRQGDKIAEMGRSNADRVKLRFEIRRNGNPVDPEPYLNGR 167
             V+ G KIA MG +     +L FEIR  G  V+P  YL  R
Sbjct: 338 QEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR 379