Pairwise Alignments

Query, 167 a.a., tRNA pseudouridine(13) synthase (EC 5.4.99.27) from Variovorax sp. SCN45

Subject, 352 a.a., tRNA pseudouridine synthase D from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 6e-37
 Identities = 74/155 (47%), Positives = 97/155 (62%)

Query: 13  PRAHGAPALRARIRSAPEDFRVEELPSFAASGSGEHLLLTVEKRGMNTAFAAKRLAQWAG 72
           PRA G P   A +++  EDF+V+E+     SG GEHL L VEKR +NT  AA+RLA+ AG
Sbjct: 9   PRASGEPLGTAILKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAARRLARAAG 68

Query: 73  VGEVAIGYAGLKDRHAVTVQRFSGHPPKRVAPDLALLESDELRVLEHHWHAKKLPRGALA 132
           V   +I YAGLKDR A+T Q FS H P +  PDL+  E   LRVL+   H +KL RGA +
Sbjct: 69  VPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQRKLQRGAHS 128

Query: 133 GNRFVLALREVEGERDRIEQRLQEISAHGVPNYFG 167
            N F L L  +  +   ++ RL+++   GVPNYFG
Sbjct: 129 ANGFTLRLTALAADHQAVDARLEQLRQQGVPNYFG 163