Pairwise Alignments

Query, 139 a.a., Small-conductance mechanosensitive channel from Variovorax sp. SCN45

Subject, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 3   VIVNFTANPKRRIDLTVGVGYDDDLKVAKDTLLALAAAHPKVLKDPAPEVLVTALAESSV 62
           +I N    P R++   VGV Y+ DL+ A++ LL LA   P+VL DPA   +V+ L +SS+
Sbjct: 171 LITNTNRQPTRKVVFDVGVDYEADLQKAREVLLELAK-DPRVLADPAAVAVVSTLGDSSI 229

Query: 63  NLELRAWAKTGDLLHTKSDLVEAIRNELIGKGLNIPYPQRDLHV 106
            + LR W KT D       L E  R+ L   G++IP+PQR + V
Sbjct: 230 TVSLRCWTKTADYWDVVFMLNELARDRLKAAGIDIPFPQRVIRV 273