Pairwise Alignments

Query, 139 a.a., Small-conductance mechanosensitive channel from Variovorax sp. SCN45

Subject, 1102 a.a., mechanosensitive channel protein, intermediate (smaller, MscS-like) conductance, K+ efflux from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 1    TAVIVNFT-ANPKRRIDLTVGVGYDDDLKVAKDTLLALAAAHPKVLKDPAPEVLVTALAE 59
            T  ++N++  +   R+ L +G+ Y  DL + +D LL  A  +P+VLKDP P V      E
Sbjct: 971  TGQLINWSLTDTVTRVTLKLGIDYGSDLDLVRDLLLKGAHENPRVLKDPEPIVYFLNFGE 1030

Query: 60   SSVNLELRAWAK-TGDLLHTKSDLVEAIRNELIGKGLNIPYPQRDLHVYHHDADG 113
            SS++ ELR   +  GD   T  ++   I  E   K  NI    R + V+  DA G
Sbjct: 1031 SSLDHELRMHVRDLGDRNPTLDEINRYINREF--KAHNIKISVRQVEVFLMDAKG 1083