Pairwise Alignments

Query, 142 a.a., 3'-to-5' exoribonuclease RNase R from Variovorax sp. SCN45

Subject, 857 a.a., exoribonuclease R from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 2e-35
 Identities = 66/145 (45%), Positives = 91/145 (62%), Gaps = 9/145 (6%)

Query: 6   LALQCSERERRADEAEREVDERYRAAWMEQHVGGEFDGVISGVTSFGLFIELDDSKVNGL 65
           L  QCS  ERRADEA R+V    +  +M+  VG  F GVI+ VT FGLF+EL D  V GL
Sbjct: 633 LGEQCSMTERRADEATRDVVNWLKCEFMKDRVGETFPGVITAVTGFGLFVELTDIYVEGL 692

Query: 66  VHVTQLPHDYYHFDPIRKTLSGERTGREYRLGDRVRIVVLKASVEDRKIDFKLVD----- 120
           VHV+ LP DYYHFDP+   L+GERTGR +RLGD + + V++  +++RKIDF++ +     
Sbjct: 693 VHVSALPGDYYHFDPVHHRLAGERTGRSFRLGDTIEVKVMRVDLDERKIDFEVSEKTLAA 752

Query: 121 ----EERGVKPPPPRGQAAKRTKQK 141
               ++RG  P   + +    T+ K
Sbjct: 753 PIGRKQRGAAPVAEKAEQQPATEAK 777