Pairwise Alignments

Query, 303 a.a., Transcriptional activator MetR from Variovorax sp. SCN45

Subject, 309 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

 Score =  239 bits (610), Expect = 6e-68
 Identities = 118/291 (40%), Positives = 178/291 (61%)

Query: 1   MLERTHLSIVQEVDKQGSLTAAAEVLHLTQSALSHSIRKLEAQLGTEIWQREGRSLRLTQ 60
           M++  HL  +  + +  SL  AAE LHLTQSALSH  R +E ++GT ++ R+ R +R T 
Sbjct: 1   MIDLRHLRTLHALRETDSLHEAAERLHLTQSALSHQFRDMEERIGTPLFVRKSRPVRFTS 60

Query: 61  AGQYLLAVANRVLPQLDLAEERLRQFAQGERGSLRIGMECHPCYQWLLKVVSPYLASWPD 120
           AG  LL +A++VLPQ+   E  L + A G  G L I +ECH CYQWL+  V  +  +WP+
Sbjct: 61  AGLKLLQLADQVLPQIRNTERDLGKLAGGCAGRLHIAIECHSCYQWLMPSVDEFRGAWPE 120

Query: 121 VDVDVKQKFQFGGIGALFGYEIDLLVTPDPLYKPGLHYEPVFDYEQVLVVPRGHALANVP 180
           V++D+   F F  + AL   ++DL+VT DP+  PG+ Y P+F YE +L +   HA+ + P
Sbjct: 121 VELDLASGFSFAPLPALERGDLDLVVTSDPVTLPGISYVPLFSYEALLAIDNHHAMRHKP 180

Query: 181 HVKPEHLTQEVLVTYPVATDRLDIYNMFLMPAGVTPRRHKAIETTDIMLQMVASGRGVAA 240
           +++P  +  + L+TYP+   RLDI+  FL PA V P + +  E T +M+Q+VASGRGV  
Sbjct: 181 YLEPADIASQTLITYPIERTRLDIFTRFLDPADVEPAQVRTSELTVMMMQLVASGRGVCC 240

Query: 241 LPRWLVEEYAEKMDIVPVRLGPRGIAKQIFLGAREADIEVDYLKAFVELAR 291
           LP W V EY+ +  +   RLG  G+   ++   R   +EV Y++ F+  A+
Sbjct: 241 LPNWAVHEYSSRGYVTAKRLGEHGLQANLYAALRSDMLEVPYMRDFLLTAK 291