Pairwise Alignments

Query, 303 a.a., Transcriptional activator MetR from Variovorax sp. SCN45

Subject, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

 Score =  230 bits (587), Expect = 3e-65
 Identities = 115/293 (39%), Positives = 176/293 (60%)

Query: 1   MLERTHLSIVQEVDKQGSLTAAAEVLHLTQSALSHSIRKLEAQLGTEIWQREGRSLRLTQ 60
           MLE  HL  +  + +  SL  AAE LHLTQSALSH  ++LE +LG  I+ R+ + +R T 
Sbjct: 1   MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTS 60

Query: 61  AGQYLLAVANRVLPQLDLAEERLRQFAQGERGSLRIGMECHPCYQWLLKVVSPYLASWPD 120
           AG  LL +A+  LP L  AE  + + A G  G L + +ECH C+QWL+  +  +  +WP+
Sbjct: 61  AGLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE 120

Query: 121 VDVDVKQKFQFGGIGALFGYEIDLLVTPDPLYKPGLHYEPVFDYEQVLVVPRGHALANVP 180
           V++D+   F F  + AL   ++DL+VT DP+   G+ Y P+F YE +L V   H LA+ P
Sbjct: 121 VELDLASGFAFAPLPALARGDLDLVVTSDPVDLAGITYVPLFTYEAMLAVANQHPLASKP 180

Query: 181 HVKPEHLTQEVLVTYPVATDRLDIYNMFLMPAGVTPRRHKAIETTDIMLQMVASGRGVAA 240
           ++ P+ L  + L+TYPV  DRLDI+  FL PA + P   +  E T +M+Q+VASGRGV  
Sbjct: 181 YIVPQDLLDQTLITYPVERDRLDIFTRFLEPADIEPAAVRTSELTVMMMQLVASGRGVCG 240

Query: 241 LPRWLVEEYAEKMDIVPVRLGPRGIAKQIFLGAREADIEVDYLKAFVELARQS 293
           +P W + EY+ +  +   RLG +G+   ++   R   ++  Y++ F+  A+ +
Sbjct: 241 MPHWALHEYSSRGYVKGKRLGEKGLFATLYAAVRTDMLDAPYMRDFLLTAKDT 293