Pairwise Alignments

Query, 178 a.a., RNA polymerase sigma factor RpoE from Variovorax sp. SCN45

Subject, 184 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score =  108 bits (269), Expect = 7e-29
 Identities = 59/152 (38%), Positives = 86/152 (56%)

Query: 7   PALRNFLVSRYDELKQRLARRLGNSDQASDALQDTWLRLESRDDIDGVRDPASYLLRVAV 66
           P  +  L + Y +L +RLAR LG  D AS++L D WLRL      D V+ P +Y+ RVA 
Sbjct: 21  PDFQALLAANYADLHRRLARHLGCGDAASESLHDAWLRLADASFTDSVQSPVAYIYRVAC 80

Query: 67  NLAYDQLGKQGRLATPEEIDALLEDAPDPAPGPSQIAEDRSEMAALAALIARMPPRRRQV 126
           N A D+L  +       + + +LE   D +PGP  IAE RS++ A+   +  +P R + +
Sbjct: 81  NAAMDRLRAERPWQYAGDAEDMLEQVVDHSPGPELIAEARSDLKAVERAMQGLPNRHQDI 140

Query: 127 LVMVRWEHLPQREVAARLGISLRTVEKELKDA 158
           LV +R   L + EVA R G+SLR V+  L+ A
Sbjct: 141 LVALRVHELTRHEVAVRHGLSLRRVDTTLRQA 172