Pairwise Alignments

Query, 462 a.a., protease Do from Variovorax sp. SCN45

Subject, 492 a.a., putative periplasmic serine endoprotease DegP-like from Pseudomonas putida KT2440

 Score =  327 bits (837), Expect = 7e-94
 Identities = 192/447 (42%), Positives = 272/447 (60%), Gaps = 22/447 (4%)

Query: 4   SVPARLAALVTAAACLAPGLPLHAAMPWPASGLSQLVKAYGPAVVHIGVERPSAPARRFS 63
           S+P   + L+  AA L  G  + A         + LV+   PAVV+I  ++   P RR +
Sbjct: 17  SIPRLKSYLMMFAAVLMLGQVVAAQAEEALPDFTTLVEQASPAVVNISTKQ-KLPDRRIA 75

Query: 64  DRWLLRVPGQLP------------QPQA-----EGDESSLGTGFIVSDDGLILTNAHVVA 106
              +  + G  P            QP++     + +  SLG+GFI+S DG +LTN HVVA
Sbjct: 76  ANQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 135

Query: 107 RGTQINVKLPDRREFKARLVGLDAVADVALLKIDAAGLPTVRIGDPSGVEPGDGVVAIGS 166
              +I V+L DR E +A+LVG D   DVALLK+D   LPTV++GD   ++ G+ V+AIGS
Sbjct: 136 DADEIIVRLSDRSELQAKLVGTDPRTDVALLKVDGKNLPTVKLGDSEKLKVGEWVLAIGS 195

Query: 167 PYGFGNSVTAGIVSAKGRLLPGAEYMQFLQTDVPINPGNSGGPLFNLRGEVIGINSRIYS 226
           P+GF +SVT GIVSAKGR LP   Y+ F+QTDV INPGNSGGPLFN++GEV+GINS+I++
Sbjct: 196 PFGFDHSVTKGIVSAKGRTLPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFT 255

Query: 227 RSGGYQGLSFAIPIDAAMRIKDQLLSTGTVTRGRIGVSVQEVGQALADTFRLPRPAGALV 286
           RSGG+ GLSFAIPID A+ + +QL   G V+RG +GV +QEV + LA++F L +PAGALV
Sbjct: 256 RSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALV 315

Query: 287 NYVEPRGAADRGGLKPGDVILSVQGREVVQAADALGFIAEQAPGENIRLRVWRERAEQML 346
             V   G A +GGL+ GDVILS+ G+ +V +AD    +     GE  +L + R    Q L
Sbjct: 316 AQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNL 375

Query: 347 EVRVEGFDTPRLQADAAQAPSA---PSRLGFAVRPLAPAERQFLRVDGGLLVQRV-NAAA 402
           ++ V       +   A    SA    +RLG +V  L   +++ L + GG++++ V +  A
Sbjct: 376 DISVGALPDDDVDIGAGTEGSAERSSNRLGVSVADLTAEQKKSLELKGGVVIKEVQDGPA 435

Query: 403 SRAGVQPGDLILALNGQPIDSAEALVQ 429
           +  G++PGD+I  LN Q I SA+   +
Sbjct: 436 AMIGLRPGDVISHLNNQAIGSAKEFTE 462



 Score = 31.6 bits (70), Expect = 6e-05
 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 227 RSGGYQGLSFAIPIDAAMRIKDQLLSTGTV-----TRGRIGVSVQEVGQALADTFRLPRP 281
           R+G  Q L  ++    A+   D  +  GT      +  R+GVSV ++      +  L   
Sbjct: 368 RNGKRQNLDISV---GALPDDDVDIGAGTEGSAERSSNRLGVSVADLTAEQKKSLELK-- 422

Query: 282 AGALVNYVEPRGAADRGGLKPGDVILSVQGREVVQAADALGFIAEQAPGENIRLRVWRE 340
            G ++  V+  G A   GL+PGDVI  +  + +  A +      E     ++ +RV R+
Sbjct: 423 GGVVIKEVQD-GPAAMIGLRPGDVISHLNNQAIGSAKEFTEIAKELPKNRSVSMRVLRQ 480