Pairwise Alignments

Query, 462 a.a., protease Do from Variovorax sp. SCN45

Subject, 482 a.a., PDZ domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  255 bits (652), Expect = 2e-72
 Identities = 163/453 (35%), Positives = 244/453 (53%), Gaps = 13/453 (2%)

Query: 3   KSVPARLAALVTAAACLAPGLPLHAAMPWPASGLSQLVKAYGPAVVHIGVERP--SAPAR 60
           KS+ A LA ++   A  A    +  +        + + +   PAVV+I  +R   +A + 
Sbjct: 21  KSLAAALALVILVPAAQAQTQVVPGSREQVKLTFAPVARQVAPAVVNIYTKRVVRAAASP 80

Query: 61  RFSDRWLLRVPGQLPQPQAEGDESSLGTGFIVSDDGLILTNAHVVARGTQINVKLPDRRE 120
            F+D +  R  G +P    E  + SLG+G +++ DG ++TN HV+    ++ V L DRRE
Sbjct: 81  LFADPFFRRFFGDVPGMSQERVQRSLGSGVLIAADGTVVTNHHVIKDADEVTVVLSDRRE 140

Query: 121 FKARLVGLDAVADVALLKIDAA--GLPTVRIGDPSGVEPGDGVVAIGSPYGFGNSVTAGI 178
           F+AR+VG D   D+A+LKID      PT+ +GD   +E GD V+A+G+P+G G +VT GI
Sbjct: 141 FEARIVGSDDRTDLAVLKIDGGRESFPTLTLGDSDAIEVGDVVMAVGNPFGVGQTVTQGI 200

Query: 179 VSAKGRLLPGAEYMQ-FLQTDVPINPGNSGGPLFNLRGEVIGINSRIYSRSGGYQGLSFA 237
           VSA  R   G   +Q F+QTD  INPGNSGG L +L+G +IGIN+ IYS+ GG  G+ FA
Sbjct: 201 VSALARTNVGVSDVQSFIQTDAAINPGNSGGALVDLQGRLIGINTAIYSKDGGSNGIGFA 260

Query: 238 IPIDAAMRIKDQLLSTGTVTRGRIGVSVQEVGQALADTFRLPRPAGALVNYVEPRGAADR 297
           IP     ++   +   G V R  +G S Q V   LA   +LPRP G LVN++     A R
Sbjct: 261 IPTALVRQVAASIAKGGKVVRPWLGASGQAVTADLAQALKLPRPIGVLVNHIHGESPAAR 320

Query: 298 GGLKPGDVILSVQGREVVQAADALGFIAEQAPGENIRLRVWRERAEQMLEVR-VEGFDTP 356
           GGL  GD+I++V+GREV         +A    G + RL V R  AE+ + VR V   +TP
Sbjct: 321 GGLADGDIIVAVEGREVDDPEGMRFRLATLPIGADARLTVLRNGAERTITVRLVAPPETP 380

Query: 357 RLQADAAQAPSAPSRLGFAVRPLAPAERQFLRVDGGL-----LVQRVNAAASRAGVQPGD 411
               D           G  +  L PA  + + ++ GL        +  + A+R G+QPGD
Sbjct: 381 --PRDKTDIAGRNPFSGATLVNLNPALAEEIGINSGLTGVMIFAIKRGSVANRLGLQPGD 438

Query: 412 LILALNGQPIDSAEALVQELDVADGSAALLVQR 444
           +++ +N +P+ S     + L+      A+ ++R
Sbjct: 439 MLMKINERPVSSVADARRLLEAEQPRWAITIKR 471