Pairwise Alignments

Query, 151 a.a., Type IV fimbrial assembly protein PilC from Variovorax sp. SCN45

Subject, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

 Score = 87.4 bits (215), Expect = 2e-22
 Identities = 45/147 (30%), Positives = 86/147 (58%), Gaps = 1/147 (0%)

Query: 5   KIPVVGQILHNAAVARFARTLAVTFRAGVPLVEALDTVAGATGNVVYEKAVYRIRDDVSV 64
           ++P + Q L    +ARF R+L +  + G+P++ A+    G  GN   +  + +    V  
Sbjct: 257 RLPALHQRLMMYELARFYRSLGILLQGGIPILTAMGMARGLLGNAAAQ-GLEQASQRVGE 315

Query: 65  GYQVNMAMKQVNLFPHMVIQMTAIGEEAGALDTMLVKVAEFYEQEVNNAVDALSSLLEPL 124
           G  ++ A+   +L   + +++   GE++G L  ML + A+F++QE+   V+    L EPL
Sbjct: 316 GLPLSDALAAGHLVTPVSLRLLRAGEQSGNLGEMLERCADFHDQEIGRWVEWFVKLFEPL 375

Query: 125 IMIILGVIVGGMVVAMYLPIFKLAATI 151
           +M  +G+++G +V+ MY+PIF+LA++I
Sbjct: 376 LMTFIGLLIGLIVILMYMPIFELASSI 402



 Score = 42.4 bits (98), Expect = 9e-09
 Identities = 26/119 (21%), Positives = 61/119 (51%), Gaps = 4/119 (3%)

Query: 21  FARTLAVTFRAGVPLVEALDTVAGATGNVVYEKAVYRIRDDVSVGYQVNMAM-KQVNLFP 79
           F++ L+    AG+PL++AL+++A  +      K +  +   +  G  ++ A+ +Q  +FP
Sbjct: 70  FSQELSTLLNAGLPLIDALESLAEKSPAATARKVLAELVRQLYEGRSLSQALGQQPRVFP 129

Query: 80  HMVIQMTAIGEEAGALDTMLVKVAEFYEQEVNNAVDALSSLLEPLIMIILGVIVGGMVV 138
            + + +    E  GAL   L +   + ++        + + + PL+++++G   GG+V+
Sbjct: 130 PLYVALVQSSERTGALGDALTRYISYRQRLDLVRQKLVGASVYPLLLLLVG---GGVVL 185