Pairwise Alignments

Query, 329 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 317 a.a., Putative transmembrane sensor from Variovorax sp. SCN45

 Score =  256 bits (654), Expect = 5e-73
 Identities = 147/319 (46%), Positives = 195/319 (61%), Gaps = 9/319 (2%)

Query: 11  LEAQARDWLVRLTSGRATTVDAQDFKRWCGRSPLHAQVMAETSRLWDATRPAAEAVAQRM 70
           ++ +A+ W+VRL S +AT  DA  F+RWC +S  HA        +W A  PAA  V Q+ 
Sbjct: 4   MQREAQAWVVRLGSQQATEDDALAFRRWCAQSRAHADAFVRAREVWQAMAPAALRVRQQA 63

Query: 71  RAAEASPRAAVAAIAHPGRRYFLGAALAAGAAAFVVVRPPARLWPALSDMTADYSTATGE 130
              EA  R  VA     GRR  LG A+AA + A++ V PP  LW ++++  ADY TATGE
Sbjct: 64  ER-EARRRMPVA-----GRRALLGGAVAA-SVAYLAVSPPLGLWASVTEWGADYRTATGE 116

Query: 131 QRQVVLADSVVVEMNTQTSFNLARGAEGEPAALDLLAGEAQVLLNTARAAPFTLTAGGGK 190
           QR+V +AD  V++MNTQT  NL R  EG  + ++LLAGEA+V+   +  A  T+ A GG 
Sbjct: 117 QREVAMADGAVLQMNTQTRVNLQRRGEGGES-IELLAGEAEVVTEASAVARVTVAAAGGT 175

Query: 191 LVAAAGSRFNVRATGSEVCVTCLAGSVELNYGGRVLVAAESQQINYGGRRAELARKPDLS 250
            V+A  +RFN+R    EVCVTCLAG VE+  G + +   E +Q+ YG          D  
Sbjct: 176 -VSAVRARFNIRNLDGEVCVTCLAGQVEVARGAQQVRLDEGRQLRYGAAGLGAVAAVDTG 234

Query: 251 VVNAWRDRVLVFNDTPLSAVVEEINRYRPGRLIVTNAELGRRKVQARLRLEQLARVETLI 310
            V+AWR R LVFN  PLS VV E+NRYR GRL++T+  LGR KVQA   +++L  V  L+
Sbjct: 235 PVSAWRRRQLVFNQVPLSEVVAEVNRYRHGRLVLTSEALGRSKVQASFSIDRLDDVAMLV 294

Query: 311 GASYGAKVTTLPAGIVLLG 329
              YGA++T LP GIVLLG
Sbjct: 295 RDVYGAQLTQLPGGIVLLG 313