Pairwise Alignments

Query, 329 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 79/311 (25%), Positives = 124/311 (39%), Gaps = 23/311 (7%)

Query: 4   PSDDRADLEAQARDWLVRLTSGRATTVDAQDFKRWCGRSPLHAQVMAETSRLWDATRPAA 63
           P+ D A  +A A  W +RL +   T  + + F  W    P HA+       +W      A
Sbjct: 8   PNPDDAITDAAAH-WCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQT----A 62

Query: 64  EAVAQRMRAAEASPRAAVAAIAHPGRRYFLGAALAAGAAAFVVVRPPARLWPALSD--MT 121
           + + +     + +P A  AA     R       LA+ AA  + V P A  W       + 
Sbjct: 63  DLLPRSATVIDFNPPARHAARPRNWR------PLASAAAIALAVLPLAG-WMGWEQGWLP 115

Query: 122 ADYST-ATGEQRQVV-LADSVVVEMNTQTSFNLARGAEGEPAALDLLAGEAQVLLNTARA 179
             Y     G++ Q V L+D   V++N  T        +     L    GEA   +    +
Sbjct: 116 NHYQHFEAGDRMQTVELSDGSTVQLNLHTELTFLNYKDQRQVTLK--RGEAFFKVRHDSS 173

Query: 180 APFTLTAGGGKLVAAAGSRFNVRATGSEVCVTCLAGSV----ELNYGGRVLVAAESQQIN 235
            PF + AG G+     G++FNV     +V VT + GSV    E + GG  L        +
Sbjct: 174 HPFIVRAGSGQ-TRVTGTQFNVWKYQDQVKVTLVEGSVLVSSEGSAGGYRLGPGMQASYH 232

Query: 236 YGGRRAELARKPDLSVVNAWRDRVLVFNDTPLSAVVEEINRYRPGRLIVTNAELGRRKVQ 295
            G    +L +  D     AWR   LV ++  L   +  INRY    L++ +A  GR ++ 
Sbjct: 233 KGDFEPQLEQSDDYGNSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRIS 292

Query: 296 ARLRLEQLARV 306
                 ++ R+
Sbjct: 293 GIYNTREVGRL 303