Pairwise Alignments

Query, 329 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 99.8 bits (247), Expect = 8e-26
 Identities = 89/278 (32%), Positives = 131/278 (47%), Gaps = 27/278 (9%)

Query: 14  QARDWLVRLTSGRATTVDAQDFKRWCGRSPLHAQVMAETSR-LWDATRPAAEAVAQRMRA 72
           +A DWLV+L SG AT  D +  + WC RS  HAQ        L D  R       + +R 
Sbjct: 13  EAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVTGETLRR 72

Query: 73  AEASPRAAVAAIAHPGRRYFLGAALAAGAAAFVVVR-PPARLWPALSDMTADYSTATGEQ 131
              +      A++     + LG  L A  AA++  R  P + W      TAD  TA GEQ
Sbjct: 73  LSRN-----GAVSRRQALHRLGLWLLAAPAAWLAWRETPWQQW------TADAHTAVGEQ 121

Query: 132 RQVVLADSVVVEMNTQTSFNLARGAEGEPAALDLLAGEAQVLLNTAR-----AAPFTLTA 186
           R + LAD   V +NT T+ ++    +     +DLLAGE  +LL +A+     A P ++  
Sbjct: 122 RTLTLADGSQVLLNTDTAIDIT--FDARQRRIDLLAGE--ILLTSAKDPATPARPLSVRT 177

Query: 187 GGGKLVAAAGSRFNVRATGSEVCVTCLAGSVELN--YGGRVLVAAESQQINYGGRRAELA 244
             G+   A G+RF+VR  G    V  L G+V+    +   +L+ A  +    G R   L 
Sbjct: 178 PHGQ-ATARGTRFSVRIHGPLTQVAVLEGAVDTRPLHADSLLLKAGERSAFDGDR--VLP 234

Query: 245 RKPDLSVVNAWRDRVLVFNDTPLSAVVEEINRYRPGRL 282
             P  +   AW   +L+  D  L+ +++E+ RYRPG L
Sbjct: 235 ASPLETGDLAWEHGMLLARDMRLADLLQELARYRPGVL 272