Pairwise Alignments

Query, 329 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 95/324 (29%), Positives = 138/324 (42%), Gaps = 21/324 (6%)

Query: 6   DDRADLEAQARDWLVRLTSGRATTVDAQDFKRWCGRSPLHAQVMAETSRLWDATRPAAEA 65
           D RA    +A DWLVRL    A   D Q F+ W   +P +A+   E   LW+ T P  + 
Sbjct: 46  DARARAMDEALDWLVRLQC--ADAADTQAFEAWLSAAPENAEAYVEAEALWNGT-PLHKV 102

Query: 66  VAQRMRAAEASPRAAVAAIAHPGRRYFLGAALAAGAAAFVVVRPPARLWPALSDMTADYS 125
                +    S R  + +   P     L  A       F V   P RL        AD+ 
Sbjct: 103 ATHMHQQQRRSWRGRLRSHWKP-----LATAALLLVGLFTVGNLPMRL-------QADHL 150

Query: 126 TATGEQRQVVLADSVVVEMNTQTSFNLARGAEGEPAALDLLAGEAQVLLNTARAAPFTLT 185
           T  GE++++ L D   V +NT ++F   R  +G   A  LL GEA   +      P  + 
Sbjct: 151 TVVGERQRLQLEDGAKVLLNTNSAFASER-QDGRQVAR-LLQGEAYFQVPEGAQLPLEVE 208

Query: 186 AGGGKLVAAAGSRFNVRATGSEVCVTCLAGSVELN--YGGRVLVAAESQQINYGGRRAEL 243
           AG  +      + F VR    E  V    G V+L      R+ ++A    I+ G +    
Sbjct: 209 AGPLR-AQVRDTDFAVRYLDGEAQVRVQRGDVDLQGERDQRIRLSA-GDSISVGPQGFGQ 266

Query: 244 ARKPDLSVVNAWRDRVLVFNDTPLSAVVEEINRYRPGRLIVTNAELGRRKVQARLRLEQL 303
            ++PD+    AW D  LVF + PLS V+ E+ RY PG +I  NA+L    V    RL+Q 
Sbjct: 267 RQRPDMHKDLAWIDGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRLDQP 326

Query: 304 ARVETLIGASYGAKVTTLPAGIVL 327
                 +     A++   PA ++L
Sbjct: 327 LETLRALAHITSAQLHEYPALVIL 350