Pairwise Alignments

Query, 329 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 84/321 (26%), Positives = 129/321 (40%), Gaps = 27/321 (8%)

Query: 3   TPSDDRADLEAQARDWLVRLTSGRATTVDAQDFKRWCGRSPLHAQVMAETSRLWDATRPA 62
           TP+  + D   QA DWLV+L     +    Q F+ W    P +       S L D     
Sbjct: 5   TPAQAQVD---QAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSNLGDELAGL 61

Query: 63  AEAVAQRMRAAEASPRAAVAAIAHPGRRYFLG--AALAAGAAAFVVVRPPARLWPALSDM 120
            + +++R   A   P+A+        RR  L     LA G +     R P      L  +
Sbjct: 62  PKDLSRRTLDASQHPKAS--------RRDHLKLLGLLAVGGSLGWAAREPL----GLPQL 109

Query: 121 TADYSTATGEQRQVVLADSVVVEMNTQTSFNLARGAEGEPAALDLLAGEAQVLLNTARAA 180
            AD STATGE+RQ   +D   +++NT ++ +L   A  E   L L+ GE  +  N     
Sbjct: 110 LADTSTATGERRQWQGSDGSRLQLNTASAIDLHYSA--EQRQLKLIHGEVSLESNPNDNR 167

Query: 181 PFTLTAGGGKLVAAAGSRFNVRATGSEVCVTCLAGSVEL---NYGGRVLVAAESQQINYG 237
           PF +    G L    G +  +R     + ++   G V L   +   R ++  E+ Q+   
Sbjct: 168 PFHVATRVGPLTTFDG-QLLLRENSQGLLLSVRRGEVTLFPASASARQVLPGETLQVTAD 226

Query: 238 GRRAELARKPDLSVVNAWRDRVLVFNDTPLSAVVEEINRYRPGRLIVTNAELGRRKVQAR 297
           G         D      W + VL     PL+    E+ RYRPG L+    E+   KV   
Sbjct: 227 GSIQARTLHND---PWGWTEGVLSVQQMPLAEFASELGRYRPG-LLRCAPEVAGLKVSGT 282

Query: 298 LRLEQLARVETLIGASYGAKV 318
            +L    ++  L+  S   +V
Sbjct: 283 YQLADTGQILQLLTRSLPVRV 303