Pairwise Alignments

Query, 329 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 311 a.a., transmembrane sensor from Agrobacterium fabrum C58

 Score =  138 bits (348), Expect = 2e-37
 Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 22/321 (6%)

Query: 11  LEAQARDWLVRLTSGRATTVDAQDFKRWCGRSPLHAQVMAETSRLWDATRPAAEAVAQRM 70
           L  +A  W+VR+TSG ATT DA+   RW  RS  H Q   +++RLW     +A    ++ 
Sbjct: 9   LRREATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLWK-NLGSALGETRKT 67

Query: 71  RAAEASPRAAVAAIAHPGRRYFLGAALAAGAAAFVVVRPPARLWPALSDMTADYSTATGE 130
            A+  + R+ +AA            ++AAGAA   VV       P++  M ADY+T  GE
Sbjct: 68  SASTVTRRSFIAA-----------GSVAAGAAGVGVVLSELGFLPSVDAMLADYATGVGE 116

Query: 131 QRQVVLADSVVVEMNTQTSFNLARGAEGEPAALDLLAGEAQVLLNTARAAPFTLTAGGGK 190
           QR V L D     ++  T+ +L          L   A    V+ + AR  PF +TA  G 
Sbjct: 117 QRTVELVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDAAR--PFVVTAANGD 174

Query: 191 LVAAAGSRFNVRATGSEVCVTCLAGSVELN-YGGRVLVAAESQQINYGGRRAELARK--P 247
              A G+ F+V+    +V + CL G + +   G   L   E   I+Y   RA L +K   
Sbjct: 175 -TTATGTSFSVKHGEEDVSIECLEGHITVQCLGDSQLNGGEG--ISYS--RAGLGKKVAA 229

Query: 248 DLSVVNAWRDRVLVFNDTPLSAVVEEINRYRPGRLIVTNAELGRRKVQARLRLEQLARVE 307
           D+    AWR  +L+F D PL+ VV ++NR+R GR+++ +++L  R++     L +   + 
Sbjct: 230 DIETAAAWRRGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEIL 289

Query: 308 TLIGASYGAKVTTLPAGIVLL 328
             +  +   +  +L  GIVLL
Sbjct: 290 AHLEETLQVRPVSLVGGIVLL 310