Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

 Score = 64.3 bits (155), Expect = 1e-15
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 1/158 (0%)

Query: 10  LRGLLTSRYVDFRNRLRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNV 69
           L+GL        R  L R+     +A D++ E++LR+        + +   YL R ASN+
Sbjct: 6   LKGLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNL 65

Query: 70  AEDR-RIANGRLLDFVEVEELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFL 128
             D  R    R  D V  E L    D+       + A+ + QAL++AL ELP R ++IF 
Sbjct: 66  LIDHIRQEARRKTDAVPHEALAEIEDEVAGLEAQAMAQQQRQALKQALAELPERTQQIFR 125

Query: 129 ASRVDETPHKDIALRYGVSVRIVEREVKAALVHCAGRL 166
            +R++   H  +A    +S   V++ +  AL +   RL
Sbjct: 126 LNRIEGMTHAQVARHLDISDSSVQKHLAKALAYVMQRL 163