Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 166 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 65.1 bits (157), Expect = 6e-16
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 2/140 (1%)

Query: 27  RRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAEDRRIANGRLLDFVEV 86
           RR  +   A+D+ H+T++RV   S    V  P AYL + A N+A D      R  + + +
Sbjct: 24  RRLRNRQQAEDLAHDTFVRVLE-SKSSEVEQPRAYLHQTARNIAVDAYRREDRR-EAITL 81

Query: 87  EELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFLASRVDETPHKDIALRYGV 146
           E     + +S DP     A     ++ERAL ELP   R+IF+  +++    ++IA R G+
Sbjct: 82  EAFDQRSPNSGDPEHFMHAIQLADSIERALSELPLNCRKIFIWQKIEGLTQQEIAERLGL 141

Query: 147 SVRIVEREVKAALVHCAGRL 166
           S  +VE+ +   L H   RL
Sbjct: 142 SKNMVEKYMIRTLRHLRDRL 161