Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 169 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 83.2 bits (204), Expect = 2e-21
 Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 22  RNRLRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAED--RRIANGR 79
           R    RR  S  + DD++ +  LR++    P  + +   Y+ R AS+V  D  RR     
Sbjct: 22  RRYFARRVASAHIVDDLVQDVMLRMHVRQSPDGIDNLEGYIFRTASSVLRDQARRDQVRH 81

Query: 80  LLDFVEVEELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFLASRVDETPHKD 139
                E+ E  H A++ R   RV +AR E+  + RALEELP R R+IFL  R +   + D
Sbjct: 82  AKGHDELTEKDHPAEE-RTADRVLQAREEIAQVVRALEELPERTRDIFLMRRYEGLAYGD 140

Query: 140 IALRYGVSVRIVEREVKAALVHCAGRLGR 168
           IA R G+SV  +E+ V  A+ H A R+ R
Sbjct: 141 IAERLGISVSAIEKHVAKAVAHIARRMAR 169