Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 57.0 bits (136), Expect = 2e-13
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 1/155 (0%)

Query: 27  RRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAEDRRIANGRLLDFVEV 86
           RR G    A D++ E +LR  R  +   V +   YLLR A N+A D   +        E 
Sbjct: 38  RRVGCRATASDLVQELFLRFWRRPEV-KVEALDTYLLRCAGNLAIDHLRSESSRERVAEA 96

Query: 87  EELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFLASRVDETPHKDIALRYGV 146
              +  A  ++ P +  E   ++Q +E  L  LP R R+IFL +R+    + +IA    +
Sbjct: 97  AVPVSEASLAQAPEQAVEVDHDLQRIEATLRALPERTRQIFLLNRIHGCKYSEIAKAMQL 156

Query: 147 SVRIVEREVKAALVHCAGRLGRDVIQRFGPGAGKQ 181
           S   VE+ +  AL  C   +         PG+ ++
Sbjct: 157 SQSAVEKHMMRALEACKASVAEPASTPRRPGSARR 191