Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 1e-18
 Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)

Query: 18  YVDFRNRLRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAEDRR--- 74
           Y +  + L  R GS   A+DV H+ +LRV   +    +  P A+L R A N+  DR    
Sbjct: 5   YRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQ 64

Query: 75  -IANGRLLDFVEVEELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFLASRVD 133
            +     LD ++ +  LH ++   D     +    +  +++AL+EL R  R+ FL  +++
Sbjct: 65  LVRQAEPLDALDADSRLHSSELQHD----LQLDQRLALMQKALDELSRPCRDSFLLRKIE 120

Query: 134 ETPHKDIALRYGVSVRIVEREVKAALVHCAGRL 166
              H+ IA R G+S  +VE+ +  A+ HC  R+
Sbjct: 121 GLSHQQIAERLGISRSLVEKHIVNAMKHCRVRM 153