Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

 Score = 64.3 bits (155), Expect = 1e-15
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%)

Query: 25  LRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAED----RRIANGRL 80
           L+R  G+   A+D+L ET+LRV+R     P+     ++ + A N+A D    RR+    L
Sbjct: 21  LQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQTARNLALDHLRARRVQARML 80

Query: 81  LDFVEVEELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFLASRVDETPHKDI 140
           +D V  E L   A  +      + A   ++ L  +L +L  R++ IF+ SR+    + +I
Sbjct: 81  VDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQRIFILSRLHGATYLEI 140

Query: 141 ALRYGVSVRIVEREVKAALVHCAG 164
           A +  VS   V++E+K  +  C G
Sbjct: 141 AEQLSVSPSTVQKELKLIMAICMG 164