Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 60.5 bits (145), Expect = 2e-14
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 5/152 (3%)

Query: 13  LLTSRYVDFRNRLRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAED 72
           L  S +   R  LR R G  + A D+  +T++R+ R     P+  P AYL  IA  +  D
Sbjct: 15  LYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMID 74

Query: 73  RRIANGRLLDFVEVEELLHFADDSRDPARVSEA--RSEVQALERALEELPRRRREIFLAS 130
           +     R L+    E L H  + +  P+   +      ++ L+RAL++L  R R+ FL +
Sbjct: 75  Q--FRRRALERAYQEGLAHLPE-AEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLA 131

Query: 131 RVDETPHKDIALRYGVSVRIVEREVKAALVHC 162
           ++D      +A R GVS   VER++  AL  C
Sbjct: 132 QLDGLSIVQVAQRLGVSRATVERDLAKALGAC 163