Pairwise Alignments

Query, 240 a.a., no description from Variovorax sp. SCN45

Subject, 885 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 18/179 (10%)

Query: 13  LTLIFGILSLAASLATADSSVRPPDAARP--MKFDIPAQPLAAALQAFAQATGQSVFFDG 70
           L +  G+ + AA +  A  +V+   AA+P  +  DIPAQ L +A+ AFA   G  V FD 
Sbjct: 16  LAIHVGLFAAAAPVYAAQPAVK---AAQPAVLMLDIPAQSLGSAVLAFADQAGLQVLFDS 72

Query: 71  QLAAGLESAPVQGELAPRDALQRLLAGTRLAARYADETTFTLVETEAAPLPAPMPPAAPT 130
           Q  AGL+S  V G+ + ++ L RLL    +  R+  E   TL   E +   A +  A  T
Sbjct: 73  QRLAGLQSTTVNGQYSVQEGLARLLGNAPVEYRFNGERQVTLTRVEQS--GAALALATTT 130

Query: 131 DAAAVPDD---GNARIVQQAVERTLCRWP--------RAQPGSYRALLQLWVGPAGHVR 178
                P+D      R V       L R P           PG Y A+ Q   G + ++R
Sbjct: 131 ITGLHPNDWVYSTPRSVSVVGREQLDRNPPRHAAEMLEEAPGVYSAVSQQDPGLSVNIR 189