Pairwise Alignments

Query, 615 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 610 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  141 bits (356), Expect = 7e-38
 Identities = 94/254 (37%), Positives = 140/254 (55%), Gaps = 12/254 (4%)

Query: 366 IDVDGLQWRYAARGEQQTEAADPVTVRSSGL-HDVKLSLRRGERVALVGPSGGGKSTLLR 424
           ID D         GE + E  D    + SG+   + L ++ GE++ L+GPSG GKSTL+ 
Sbjct: 347 IDRDNAPRLSVPHGEVRFEQVDFHYGKKSGIIGGLNLEIKAGEKIGLIGPSGAGKSTLVN 406

Query: 425 VLAGLYPPDSGSLSLDGRPV-DWTQ--LRRLATLIPQETELFEASVRENLAFGQP-RDDA 480
           +L  LY    G + +DG+ + D  Q  LR    +I Q+T L   S+R+NL +G+P   D 
Sbjct: 407 LLLRLYDLQGGRILIDGQNIADVAQESLREQIGMITQDTSLLHRSIRDNLLYGKPDATDE 466

Query: 481 QLLAALHTSTFDE---VLKANHG--DLDTAVSERGFNLSGGQRQRLCLARGVLAAQGSSL 535
           +L AA+H +  DE   +L  + G   LD  V ERG  LSGGQRQR+ +AR +L  + + +
Sbjct: 467 ELWAAVHKARADEFIPLLSDSEGRTGLDAHVGERGVKLSGGQRQRIAIARVLL--KDAPI 524

Query: 536 LLLDEPTSALDAGTEARVLERIAGAFPDACVVASIHRLSLLERFDTVVLMEAGHVVDYGP 595
           L++DE TSALD+  EA + E +        V+A  HRLS + R D +V++E G + + G 
Sbjct: 525 LIMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLEKGQIAESGS 584

Query: 596 RDAVLGRQPLLQRM 609
              +L    L  R+
Sbjct: 585 HAELLAHGGLYARL 598