Pairwise Alignments

Query, 200 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

Subject, 436 a.a., integral membrane sensor signal transduction histidine kinase from Pseudomonas putida KT2440

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 71/201 (35%), Positives = 99/201 (49%), Gaps = 17/201 (8%)

Query: 5   RLVAPLSRLAALIA-RLPPDGRGPALEVSDTAPAEIAVVTDSVNRYMGRIREHMERERTF 63
           R++AP+ RLA  +  R    G  P L   D A  E+  +  + +  +GR+R+ + RER F
Sbjct: 157 RVMAPVIRLARQVRHRDQLLGLAPPL-APDYAADEVGQLAVAFDDTLGRLRDALTRERLF 215

Query: 64  INLASHELRTPIAVIAGSAEVALAHPHMSEGLRPHVLRTQRTAAAMEELASMLLALARDP 123
            +  SHELRTP+ V+A S E+ + +P +    R  V R  R    M EL    L LA   
Sbjct: 216 TSDVSHELRTPLMVLATSCELLMENPGLDARARSQVERVARATEEMRELVKTFLMLA--- 272

Query: 124 ERALRGLAPVDLAAELPRIVDDFAYVARD----KELTISID----AGPLPLGGAPAQVLR 175
            RA R    V   A L  + D+   V RD    K LT+  D    A P+      A  L+
Sbjct: 273 -RAQRDEGAVASRATLREVADELIGVWRDTIEQKGLTLYFDGRVSASPVLYN---ATFLQ 328

Query: 176 DVIGNLIRNAIENSDRGSIRI 196
            V+GNL+RNA   +D G IR+
Sbjct: 329 SVMGNLLRNAAHYTDSGYIRL 349