Pairwise Alignments

Query, 260 a.a., Conserved TM helix from Variovorax sp. SCN45

Subject, 274 a.a., transporter from Pseudomonas simiae WCS417

 Score =  101 bits (252), Expect = 1e-26
 Identities = 62/200 (31%), Positives = 102/200 (51%)

Query: 11  LRAILYQVGAFIPRLLVALVVVFVGWLIAKAARFAVTKALRAINFNVLTERAGLDNFLRQ 70
           + A+  +V  FIP L  ALV+V +G+++AK     ++K L  +  + L    GL   L +
Sbjct: 14  MTALWTKVANFIPNLFGALVLVLLGFVVAKLLDTLLSKLLAKLGLDRLMAGTGLTKLLGR 73

Query: 71  GGLAGDTSSLFGILAYWLVILASLLIAFNGMGLSYIADLLGRIVWFVPNVFVALLVLAFG 130
            GL    S+L G + YW V+L  L+ A   +GL  ++  L  +  ++P VF   LVL  G
Sbjct: 74  AGLQVPISTLIGKIVYWFVLLIFLVSAAQSLGLERVSATLDMLALYLPKVFGGALVLLVG 133

Query: 131 SYFAKFVGDAVGSYFRGVKMQDAMLFAKVAQYAVMAFVILIALDQIKVGGDIVRESFLVI 190
              A+     V     GV +  A    ++AQ  V+   I +A+ Q++V  D++    +++
Sbjct: 134 VLLAQLANGLVRGAAEGVGLDYAAGLGRIAQGLVIIISISVAISQLEVKTDLLNHVIVIV 193

Query: 191 LAGVVFALALAFGLAGKDWA 210
           L  V  A+ALA GL  ++ A
Sbjct: 194 LITVGLAVALAMGLGSREIA 213