Pairwise Alignments

Query, 222 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 291 a.a., putative drug/metabolite transporter from Pseudomonas putida KT2440

 Score =  115 bits (287), Expect = 1e-30
 Identities = 75/206 (36%), Positives = 104/206 (50%), Gaps = 10/206 (4%)

Query: 2   VPFALFAWGAERAPAGIGAITSAMTVLFAALVGFAFFGEKIGGRRALALLGGFAGVSVLA 61
           +P   ++  A+  PAG  AI +A T L   LVG  FF E +   +   +  G  GV +L+
Sbjct: 77  IPATFYSVAAQVLPAGYSAIFNATTPLMGVLVGVLFFREPMTLAKLCGIFLGLFGVGILS 136

Query: 62  AGKAAGAGIGWAVAAGC----AAAFLYGVGLHLVRRHLGGLPPAAVASSTLLSAALLMLP 117
              A    +  A+  G     AA   YG    L RR + GL     A  ++L A L++ P
Sbjct: 137 G--AGPVALDMALLQGALACLAATTCYGFAGFLARRWISGLDSRLSALGSMLGATLMLTP 194

Query: 118 L----ALAQWPAQAIAPRAWGAALMLGLLCTGLAYLLFYRLVARIGAARTSLVTYLIPLF 173
           L    AL Q PA       W + L LGLLCT  AY+L++RL+  IG  + S VT+LIP+F
Sbjct: 195 LFGWSALTQPPASWGGWEVWLSLLGLGLLCTAFAYILYFRLLEEIGPVKASTVTFLIPVF 254

Query: 174 GVAWAWLLLDEPVTASMAAAGALTAL 199
           GV W   LL+EP++ +    G L  L
Sbjct: 255 GVLWGAWLLNEPLSMAHLYGGLLIGL 280



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 9/115 (7%)

Query: 74  VAAGCAAAFLYGVGLHLVRRHLGGLPPAAVASSTLLSAALLMLPLALAQWPAQAIAPRAW 133
           +AA   A+FL+   + ++   LG +P A    S      +++L  A  +W  Q       
Sbjct: 12  LAAVWGASFLF---MRIIAPELGTVPTAFFRVSIACLGLIVILAAARVRWNFQG----KL 64

Query: 134 GAALMLGLLCTGLAYLLFYRLVARI-GAARTSLVTYLIPLFGVAWAWLLLDEPVT 187
           GA L+LG++ +G+    FY + A++  A  +++     PL GV    L   EP+T
Sbjct: 65  GACLVLGMINSGIP-ATFYSVAAQVLPAGYSAIFNATTPLMGVLVGVLFFREPMT 118