Pairwise Alignments

Query, 147 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 355 a.a., 23S rRNA pseudouridine 2605 synthase from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 2/133 (1%)

Query: 13  VGRLDKASEGLLLFCNDPQWAARITDPELGPDKTYRVQVDAIPDEAQLRALEAGVDDDGE 72
           +GRLD  + GLLLF  D + A R+  P    D+ Y V+V    D+  +  L+AGV  +  
Sbjct: 118 IGRLDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDG 177

Query: 73  RLRAKSVRLLRSGEK-NAWLEIVLDEGRNRQIRRLLAAFGLETLLLVRVAIGELPL-GEL 130
             +   ++    GE  N W   V+ EGRNR++RRL  + G+    L RV  G + L  +L
Sbjct: 178 PAKFTDIQKAPGGEGFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDL 237

Query: 131 PKGQWRVLDEEDL 143
           P G+WR + + ++
Sbjct: 238 PMGRWREMTQGEI 250



 Score = 22.3 bits (46), Expect = 0.008
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 60  LRALEAGVDDDGERLRAKSVRLLRSGEK 87
           L A++    D  ERL+ KS R L  GE+
Sbjct: 264 LPAMKLKAKDKMERLQRKSTRPLGRGER 291